Protein–RNA interactions for Protein: A6NCW7

USP17L4, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L4A6NCW7 AC018630.3-201ENST00000542637 96 ntBASIC4□□□□□ -1.77
USP17L4A6NCW7 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
USP17L4A6NCW7 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4□□□□□ -1.77
USP17L4A6NCW7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC4□□□□□ -1.77
USP17L4A6NCW7 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4□□□□□ -1.77
USP17L4A6NCW7 RNU6-407P-201ENST00000365280 104 ntBASIC3.99□□□□□ -1.77
USP17L4A6NCW7 RNU6-728P-201ENST00000365375 104 ntBASIC3.99□□□□□ -1.77
USP17L4A6NCW7 RNU6-643P-201ENST00000384018 107 ntBASIC3.99□□□□□ -1.77
USP17L4A6NCW7 AL606845.1-201ENST00000404881 255 ntBASIC3.99□□□□□ -1.77
USP17L4A6NCW7 SNORD65B-201ENST00000459126 73 ntBASIC3.99□□□□□ -1.77
USP17L4A6NCW7 RN7SL863P-201ENST00000462370 296 ntBASIC3.99□□□□□ -1.77
USP17L4A6NCW7 RPL36AP21-201ENST00000490372 323 ntBASIC3.99□□□□□ -1.77
USP17L4A6NCW7 ATP5EP1-201ENST00000510257 156 ntBASIC3.99□□□□□ -1.77
USP17L4A6NCW7 SNORA25.12-201ENST00000516202 82 ntBASIC3.99□□□□□ -1.77
USP17L4A6NCW7 SNORA70.19-201ENST00000516717 90 ntBASIC3.99□□□□□ -1.77
USP17L4A6NCW7 RNU7-116P-201ENST00000516940 62 ntBASIC3.99□□□□□ -1.77
USP17L4A6NCW7 MIR4738-201ENST00000579134 87 ntBASIC3.99□□□□□ -1.77
USP17L4A6NCW7 AP003357.1-201ENST00000604497 148 ntBASIC3.99□□□□□ -1.77
USP17L4A6NCW7 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.99□□□□□ -1.77
USP17L4A6NCW7 AC002064.3-201ENST00000623448 346 ntBASIC3.99□□□□□ -1.77
USP17L4A6NCW7 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
USP17L4A6NCW7 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
USP17L4A6NCW7 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.99□□□□□ -1.77
USP17L4A6NCW7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
USP17L4A6NCW7 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.98□□□□□ -1.77
USP17L4A6NCW7 AC010154.1-201ENST00000425857 269 ntBASIC3.98□□□□□ -1.77
USP17L4A6NCW7 AL353705.1-201ENST00000433468 480 ntBASIC3.98□□□□□ -1.77
USP17L4A6NCW7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.98□□□□□ -1.77
USP17L4A6NCW7 RNVU1-4-201ENST00000612985 164 ntBASIC3.98□□□□□ -1.77
USP17L4A6NCW7 MIR7157-201ENST00000635801 60 ntBASIC3.98□□□□□ -1.77
USP17L4A6NCW7 MIR3658-201ENST00000636291 56 ntBASIC3.98□□□□□ -1.77
USP17L4A6NCW7 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
USP17L4A6NCW7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
USP17L4A6NCW7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
USP17L4A6NCW7 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
USP17L4A6NCW7 FAM35DP-201ENST00000323387 2712 ntBASIC3.97□□□□□ -1.77
USP17L4A6NCW7 AC100821.1-201ENST00000523153 2479 ntBASIC3.97□□□□□ -1.77
USP17L4A6NCW7 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.97□□□□□ -1.77
USP17L4A6NCW7 RNU1-72P-201ENST00000362976 153 ntBASIC3.97□□□□□ -1.77
USP17L4A6NCW7 RNU6-1323P-201ENST00000384025 107 ntBASIC3.97□□□□□ -1.77
USP17L4A6NCW7 SNORD116-13-201ENST00000384408 92 ntBASIC3.97□□□□□ -1.77
USP17L4A6NCW7 SNORA44-201ENST00000384584 132 ntBASIC3.97□□□□□ -1.77
USP17L4A6NCW7 MT-TT-201ENST00000387460 66 ntBASIC3.97□□□□□ -1.77
USP17L4A6NCW7 RNU6-1168P-201ENST00000390831 104 ntBASIC3.97□□□□□ -1.77
USP17L4A6NCW7 SNORD37.2-201ENST00000391075 66 ntBASIC3.97□□□□□ -1.77
USP17L4A6NCW7 AC008134.1-201ENST00000420943 193 ntBASIC3.97□□□□□ -1.77
USP17L4A6NCW7 AC008267.6-201ENST00000441664 139 ntBASIC3.97□□□□□ -1.77
USP17L4A6NCW7 AC016925.1-201ENST00000458303 298 ntBASIC3.97□□□□□ -1.77
USP17L4A6NCW7 RNA5SP272-201ENST00000516095 111 ntBASIC3.97□□□□□ -1.77
USP17L4A6NCW7 RNU6-948P-201ENST00000516374 107 ntBASIC3.97□□□□□ -1.77
USP17L4A6NCW7 AC127455.1-201ENST00000565496 145 ntBASIC3.97□□□□□ -1.77
USP17L4A6NCW7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.97□□□□□ -1.77
USP17L4A6NCW7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
USP17L4A6NCW7 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.97□□□□□ -1.77
USP17L4A6NCW7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
USP17L4A6NCW7 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
USP17L4A6NCW7 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
USP17L4A6NCW7 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
USP17L4A6NCW7 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.77
USP17L4A6NCW7 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
USP17L4A6NCW7 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
USP17L4A6NCW7 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
USP17L4A6NCW7 RNY3P5-201ENST00000384127 102 ntBASIC3.96□□□□□ -1.78
USP17L4A6NCW7 RNU6-383P-201ENST00000410864 94 ntBASIC3.96□□□□□ -1.78
USP17L4A6NCW7 MICF-203ENST00000432679 129 ntBASIC3.96□□□□□ -1.78
USP17L4A6NCW7 RPS12P18-201ENST00000442381 270 ntBASIC3.96□□□□□ -1.78
USP17L4A6NCW7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.96□□□□□ -1.78
USP17L4A6NCW7 AC016717.1-201ENST00000448918 286 ntBASIC3.96□□□□□ -1.78
USP17L4A6NCW7 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.96□□□□□ -1.78
USP17L4A6NCW7 RAC1P5-201ENST00000512182 576 ntBASIC3.96□□□□□ -1.78
USP17L4A6NCW7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.96□□□□□ -1.78
USP17L4A6NCW7 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.96□□□□□ -1.78
USP17L4A6NCW7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.96□□□□□ -1.78
USP17L4A6NCW7 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
USP17L4A6NCW7 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.96□□□□□ -1.78
USP17L4A6NCW7 AC005972.2-201ENST00000604690 348 ntBASIC3.96□□□□□ -1.78
USP17L4A6NCW7 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
USP17L4A6NCW7 AC006435.5-201ENST00000624486 112 ntBASIC3.96□□□□□ -1.78
USP17L4A6NCW7 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
USP17L4A6NCW7 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.96□□□□□ -1.78
USP17L4A6NCW7 AL365361.1-201ENST00000566942 3481 ntBASIC3.96□□□□□ -1.78
USP17L4A6NCW7 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
USP17L4A6NCW7 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
USP17L4A6NCW7 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.95□□□□□ -1.78
USP17L4A6NCW7 MAPK10-322ENST00000641485 4530 ntBASIC3.95□□□□□ -1.78
USP17L4A6NCW7 RNU6-438P-201ENST00000365561 103 ntBASIC3.95□□□□□ -1.78
USP17L4A6NCW7 RNU6-1235P-201ENST00000384559 107 ntBASIC3.95□□□□□ -1.78
USP17L4A6NCW7 MIR591-201ENST00000385290 95 ntBASIC3.95□□□□□ -1.78
USP17L4A6NCW7 RNU1-101P-201ENST00000391171 127 ntBASIC3.95□□□□□ -1.78
USP17L4A6NCW7 AC126124.2-201ENST00000413542 321 ntBASIC3.95□□□□□ -1.78
USP17L4A6NCW7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.95□□□□□ -1.78
USP17L4A6NCW7 RPL30P4-201ENST00000429309 333 ntBASIC3.95□□□□□ -1.78
USP17L4A6NCW7 RNU6-498P-201ENST00000459468 107 ntBASIC3.95□□□□□ -1.78
USP17L4A6NCW7 RNA5SP20-201ENST00000515976 84 ntBASIC3.95□□□□□ -1.78
USP17L4A6NCW7 AC112693.2-201ENST00000556538 232 ntBASIC3.95□□□□□ -1.78
USP17L4A6NCW7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.95□□□□□ -1.78
USP17L4A6NCW7 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.95□□□□□ -1.78
USP17L4A6NCW7 AC023043.3-201ENST00000593113 385 ntBASIC3.95□□□□□ -1.78
USP17L4A6NCW7 POLR3GP1-201ENST00000594073 261 ntBASIC3.95□□□□□ -1.78
USP17L4A6NCW7 AL033523.1-201ENST00000605153 153 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms