Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 Y_RNA.329-201ENST00000365209 107 ntBASIC3.04□□□□□ -1.92
CCDC163A0A0D9SF12 RNU6-975P-201ENST00000384296 105 ntBASIC3.04□□□□□ -1.92
CCDC163A0A0D9SF12 MIR184-201ENST00000384962 84 ntBASIC3.04□□□□□ -1.92
CCDC163A0A0D9SF12 MT-TG-201ENST00000387429 68 ntBASIC3.04□□□□□ -1.92
CCDC163A0A0D9SF12 AL603910.2-201ENST00000407268 136 ntBASIC3.04□□□□□ -1.92
CCDC163A0A0D9SF12 MIR1185-2-201ENST00000408687 86 ntBASIC3.04□□□□□ -1.92
CCDC163A0A0D9SF12 RNU6-1199P-201ENST00000411249 104 ntBASIC3.04□□□□□ -1.92
CCDC163A0A0D9SF12 NDUFB4P10-201ENST00000452541 359 ntBASIC3.04□□□□□ -1.92
CCDC163A0A0D9SF12 SNORA4.4-201ENST00000515921 135 ntBASIC3.04□□□□□ -1.92
CCDC163A0A0D9SF12 AC027419.1-201ENST00000522976 328 ntBASIC3.04□□□□□ -1.92
CCDC163A0A0D9SF12 MIR4319-201ENST00000577285 85 ntBASIC3.04□□□□□ -1.92
CCDC163A0A0D9SF12 MIR4435-1-201ENST00000582552 80 ntBASIC3.04□□□□□ -1.92
CCDC163A0A0D9SF12 AL590240.4-201ENST00000616908 390 ntBASIC3.04□□□□□ -1.92
CCDC163A0A0D9SF12 snoZ196.1-201ENST00000625269 89 ntBASIC3.04□□□□□ -1.92
CCDC163A0A0D9SF12 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC163A0A0D9SF12 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC163A0A0D9SF12 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
CCDC163A0A0D9SF12 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC163A0A0D9SF12 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
CCDC163A0A0D9SF12 MIR410-201ENST00000362222 80 ntBASIC3.03□□□□□ -1.92
CCDC163A0A0D9SF12 Y_RNA.65-201ENST00000362846 100 ntBASIC3.03□□□□□ -1.92
CCDC163A0A0D9SF12 RNU6-326P-201ENST00000365480 107 ntBASIC3.03□□□□□ -1.92
CCDC163A0A0D9SF12 MIR592-201ENST00000384959 97 ntBASIC3.03□□□□□ -1.92
CCDC163A0A0D9SF12 U3.40-201ENST00000408706 208 ntBASIC3.03□□□□□ -1.92
CCDC163A0A0D9SF12 MIR548H3-201ENST00000408771 118 ntBASIC3.03□□□□□ -1.92
CCDC163A0A0D9SF12 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.03□□□□□ -1.92
CCDC163A0A0D9SF12 OOSP1P1-201ENST00000423265 274 ntBASIC3.03□□□□□ -1.92
CCDC163A0A0D9SF12 SUMO1P4-201ENST00000429430 302 ntBASIC3.03□□□□□ -1.92
CCDC163A0A0D9SF12 AL137159.1-201ENST00000452808 512 ntBASIC3.03□□□□□ -1.92
CCDC163A0A0D9SF12 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.03□□□□□ -1.92
CCDC163A0A0D9SF12 AC018868.1-201ENST00000491307 315 ntBASIC3.03□□□□□ -1.92
CCDC163A0A0D9SF12 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC163A0A0D9SF12 MTND1P19-201ENST00000511780 315 ntBASIC3.03□□□□□ -1.92
CCDC163A0A0D9SF12 AL512605.2-201ENST00000592972 256 ntBASIC3.03□□□□□ -1.92
CCDC163A0A0D9SF12 DEFB117-201ENST00000602356 141 ntBASIC3.03□□□□□ -1.92
CCDC163A0A0D9SF12 PWAR6-201ENST00000552334 4618 ntBASIC3.03□□□□□ -1.92
CCDC163A0A0D9SF12 RNU6-1266P-201ENST00000362794 105 ntBASIC3.02□□□□□ -1.93
CCDC163A0A0D9SF12 RNU1-91P-201ENST00000364746 163 ntBASIC3.02□□□□□ -1.93
CCDC163A0A0D9SF12 RNU2-48P-201ENST00000410694 191 ntBASIC3.02□□□□□ -1.93
CCDC163A0A0D9SF12 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.02□□□□□ -1.93
CCDC163A0A0D9SF12 AC016925.1-201ENST00000458303 298 ntBASIC3.02□□□□□ -1.93
CCDC163A0A0D9SF12 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC163A0A0D9SF12 RN7SKP132-201ENST00000516001 208 ntBASIC3.02□□□□□ -1.93
CCDC163A0A0D9SF12 RNU2-12P-201ENST00000517216 168 ntBASIC3.02□□□□□ -1.93
CCDC163A0A0D9SF12 RPL21P9-201ENST00000556149 474 ntBASIC3.02□□□□□ -1.93
CCDC163A0A0D9SF12 MIR5194-201ENST00000582634 120 ntBASIC3.02□□□□□ -1.93
CCDC163A0A0D9SF12 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.02□□□□□ -1.93
CCDC163A0A0D9SF12 RMST_8.1-201ENST00000610287 165 ntBASIC3.02□□□□□ -1.93
CCDC163A0A0D9SF12 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC163A0A0D9SF12 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC163A0A0D9SF12 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC163A0A0D9SF12 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC163A0A0D9SF12 RNU4-82P-201ENST00000362443 140 ntBASIC3.01□□□□□ -1.93
CCDC163A0A0D9SF12 RNU6-1318P-201ENST00000365389 103 ntBASIC3.01□□□□□ -1.93
CCDC163A0A0D9SF12 Y_RNA.562-201ENST00000384695 113 ntBASIC3.01□□□□□ -1.93
CCDC163A0A0D9SF12 SNORD67-201ENST00000390833 111 ntBASIC3.01□□□□□ -1.93
CCDC163A0A0D9SF12 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.01□□□□□ -1.93
CCDC163A0A0D9SF12 HMGN2P35-201ENST00000412164 270 ntBASIC3.01□□□□□ -1.93
CCDC163A0A0D9SF12 AC139712.2-201ENST00000424302 339 ntBASIC3.01□□□□□ -1.93
CCDC163A0A0D9SF12 AL109933.2-201ENST00000452651 260 ntBASIC3.01□□□□□ -1.93
CCDC163A0A0D9SF12 RNU6-1023P-201ENST00000516137 106 ntBASIC3.01□□□□□ -1.93
CCDC163A0A0D9SF12 AC078938.1-201ENST00000620993 318 ntBASIC3.01□□□□□ -1.93
CCDC163A0A0D9SF12 AC073476.4-201ENST00000628409 72 ntBASIC3.01□□□□□ -1.93
CCDC163A0A0D9SF12 U6.115-201ENST00000636045 103 ntBASIC3.01□□□□□ -1.93
CCDC163A0A0D9SF12 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.01□□□□□ -1.93
CCDC163A0A0D9SF12 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CCDC163A0A0D9SF12 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
CCDC163A0A0D9SF12 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3□□□□□ -1.93
CCDC163A0A0D9SF12 RNU4-80P-201ENST00000363200 141 ntBASIC3□□□□□ -1.93
CCDC163A0A0D9SF12 Y_RNA.352-201ENST00000365439 102 ntBASIC3□□□□□ -1.93
CCDC163A0A0D9SF12 Y_RNA.416-201ENST00000384014 113 ntBASIC3□□□□□ -1.93
CCDC163A0A0D9SF12 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3□□□□□ -1.93
CCDC163A0A0D9SF12 AC123900.1-201ENST00000420390 96 ntBASIC3□□□□□ -1.93
CCDC163A0A0D9SF12 MTCO1P5-201ENST00000433573 344 ntBASIC3□□□□□ -1.93
CCDC163A0A0D9SF12 PRELID3BP1-201ENST00000457142 540 ntBASIC3□□□□□ -1.93
CCDC163A0A0D9SF12 RNU6-436P-201ENST00000516171 114 ntBASIC3□□□□□ -1.93
CCDC163A0A0D9SF12 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3□□□□□ -1.93
CCDC163A0A0D9SF12 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3□□□□□ -1.93
CCDC163A0A0D9SF12 MIR6715A-201ENST00000615929 79 ntBASIC3□□□□□ -1.93
CCDC163A0A0D9SF12 AC127459.3-201ENST00000624328 466 ntBASIC3□□□□□ -1.93
CCDC163A0A0D9SF12 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC163A0A0D9SF12 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
CCDC163A0A0D9SF12 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
CCDC163A0A0D9SF12 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC163A0A0D9SF12 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC163A0A0D9SF12 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CCDC163A0A0D9SF12 Y_RNA.44-201ENST00000362676 108 ntBASIC2.99□□□□□ -1.93
CCDC163A0A0D9SF12 SNORD115-3-201ENST00000363100 82 ntBASIC2.99□□□□□ -1.93
CCDC163A0A0D9SF12 Y_RNA.418-201ENST00000384029 102 ntBASIC2.99□□□□□ -1.93
CCDC163A0A0D9SF12 AL031003.1-201ENST00000404229 172 ntBASIC2.99□□□□□ -1.93
CCDC163A0A0D9SF12 AL139109.1-201ENST00000455491 297 ntBASIC2.99□□□□□ -1.93
CCDC163A0A0D9SF12 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC163A0A0D9SF12 SCGB1D5P-201ENST00000515134 247 ntBASIC2.99□□□□□ -1.93
CCDC163A0A0D9SF12 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC163A0A0D9SF12 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
CCDC163A0A0D9SF12 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.98□□□□□ -1.93
CCDC163A0A0D9SF12 AL161431.1-201ENST00000618966 4205 ntBASIC2.98□□□□□ -1.93
CCDC163A0A0D9SF12 AC024067.1-201ENST00000426199 223 ntBASIC2.98□□□□□ -1.93
CCDC163A0A0D9SF12 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC163A0A0D9SF12 AC010531.2-201ENST00000465012 153 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms