Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSNK1G3Q9Y6M4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CSNK1G3Q9Y6M4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.51■□□□□ 0.55
CSNK1G3Q9Y6M4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CSNK1G3Q9Y6M4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CSNK1G3Q9Y6M4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CSNK1G3Q9Y6M4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSNK1G3Q9Y6M4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CSNK1G3Q9Y6M4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.51■□□□□ 0.55
CSNK1G3Q9Y6M4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.51■□□□□ 0.55
CSNK1G3Q9Y6M4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.5■□□□□ 0.55
CSNK1G3Q9Y6M4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSNK1G3Q9Y6M4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSNK1G3Q9Y6M4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CSNK1G3Q9Y6M4 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.5■□□□□ 0.55
CSNK1G3Q9Y6M4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.5■□□□□ 0.55
CSNK1G3Q9Y6M4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSNK1G3Q9Y6M4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
CSNK1G3Q9Y6M4 AC083849.1-201ENST00000615227 514 ntBASIC18.5■□□□□ 0.55
CSNK1G3Q9Y6M4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSNK1G3Q9Y6M4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CSNK1G3Q9Y6M4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CSNK1G3Q9Y6M4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CSNK1G3Q9Y6M4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CSNK1G3Q9Y6M4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CSNK1G3Q9Y6M4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.5■□□□□ 0.55
CSNK1G3Q9Y6M4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.5■□□□□ 0.55
CSNK1G3Q9Y6M4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CSNK1G3Q9Y6M4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.5■□□□□ 0.55
CSNK1G3Q9Y6M4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 LINC01311-201ENST00000565162 1445 ntBASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 SDHAP1-207ENST00000440850 2000 ntBASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 AC034232.1-201ENST00000506026 1064 ntBASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1G3Q9Y6M4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 AC069148.1-201ENST00000608741 768 ntBASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G3Q9Y6M4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms