Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC22.45■■□□□ 1.18
CYP46A1Q9Y6A2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CYP46A1Q9Y6A2 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
CYP46A1Q9Y6A2 AL031985.4-201ENST00000642138 673 ntBASIC22.45■■□□□ 1.18
CYP46A1Q9Y6A2 AC104581.1-202ENST00000635932 2618 ntBASIC22.45■■□□□ 1.18
CYP46A1Q9Y6A2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CYP46A1Q9Y6A2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC22.45■■□□□ 1.18
CYP46A1Q9Y6A2 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CYP46A1Q9Y6A2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CYP46A1Q9Y6A2 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CYP46A1Q9Y6A2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CYP46A1Q9Y6A2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
CYP46A1Q9Y6A2 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CYP46A1Q9Y6A2 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CYP46A1Q9Y6A2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
CYP46A1Q9Y6A2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC22.45■■□□□ 1.18
CYP46A1Q9Y6A2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CYP46A1Q9Y6A2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CYP46A1Q9Y6A2 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC22.45■■□□□ 1.18
CYP46A1Q9Y6A2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CYP46A1Q9Y6A2 NEFHP1-201ENST00000412845 2629 ntBASIC22.44■■□□□ 1.18
CYP46A1Q9Y6A2 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CYP46A1Q9Y6A2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CYP46A1Q9Y6A2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CYP46A1Q9Y6A2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC22.44■■□□□ 1.18
CYP46A1Q9Y6A2 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CYP46A1Q9Y6A2 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CYP46A1Q9Y6A2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC22.44■■□□□ 1.18
CYP46A1Q9Y6A2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CYP46A1Q9Y6A2 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CYP46A1Q9Y6A2 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC22.44■■□□□ 1.18
CYP46A1Q9Y6A2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CYP46A1Q9Y6A2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CYP46A1Q9Y6A2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CYP46A1Q9Y6A2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC22.44■■□□□ 1.18
CYP46A1Q9Y6A2 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC22.44■■□□□ 1.18
CYP46A1Q9Y6A2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
CYP46A1Q9Y6A2 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CYP46A1Q9Y6A2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
CYP46A1Q9Y6A2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC22.44■■□□□ 1.18
CYP46A1Q9Y6A2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC22.44■■□□□ 1.18
CYP46A1Q9Y6A2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC22.44■■□□□ 1.18
CYP46A1Q9Y6A2 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
CYP46A1Q9Y6A2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CYP46A1Q9Y6A2 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CYP46A1Q9Y6A2 AC073195.1-201ENST00000607241 877 ntBASIC22.44■■□□□ 1.18
CYP46A1Q9Y6A2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC22.44■■□□□ 1.18
CYP46A1Q9Y6A2 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC22.44■■□□□ 1.18
CYP46A1Q9Y6A2 COBL-210ENST00000632460 1941 ntTSL 5 BASIC22.44■■□□□ 1.18
CYP46A1Q9Y6A2 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC22.43■■□□□ 1.18
CYP46A1Q9Y6A2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CYP46A1Q9Y6A2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC22.43■■□□□ 1.18
CYP46A1Q9Y6A2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
CYP46A1Q9Y6A2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CYP46A1Q9Y6A2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CYP46A1Q9Y6A2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CYP46A1Q9Y6A2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CYP46A1Q9Y6A2 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CYP46A1Q9Y6A2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CYP46A1Q9Y6A2 KATNBL1P6-202ENST00000562413 1466 ntBASIC22.43■■□□□ 1.18
CYP46A1Q9Y6A2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CYP46A1Q9Y6A2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CYP46A1Q9Y6A2 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC22.43■■□□□ 1.18
CYP46A1Q9Y6A2 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
CYP46A1Q9Y6A2 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CYP46A1Q9Y6A2 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CYP46A1Q9Y6A2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
CYP46A1Q9Y6A2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC22.43■■□□□ 1.18
CYP46A1Q9Y6A2 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC22.43■■□□□ 1.18
CYP46A1Q9Y6A2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CYP46A1Q9Y6A2 AC026271.3-201ENST00000571884 352 ntBASIC22.43■■□□□ 1.18
CYP46A1Q9Y6A2 RPS15-203ENST00000586096 570 ntTSL 2 BASIC22.43■■□□□ 1.18
CYP46A1Q9Y6A2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.43■■□□□ 1.18
CYP46A1Q9Y6A2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
CYP46A1Q9Y6A2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
CYP46A1Q9Y6A2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CYP46A1Q9Y6A2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
CYP46A1Q9Y6A2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC22.43■■□□□ 1.18
CYP46A1Q9Y6A2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC22.43■■□□□ 1.18
CYP46A1Q9Y6A2 AC009113.1-201ENST00000570267 2443 ntBASIC22.42■■□□□ 1.18
CYP46A1Q9Y6A2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
CYP46A1Q9Y6A2 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CYP46A1Q9Y6A2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC22.42■■□□□ 1.18
CYP46A1Q9Y6A2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.42■■□□□ 1.18
CYP46A1Q9Y6A2 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CYP46A1Q9Y6A2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC22.42■■□□□ 1.18
CYP46A1Q9Y6A2 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
CYP46A1Q9Y6A2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CYP46A1Q9Y6A2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CYP46A1Q9Y6A2 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC22.42■■□□□ 1.18
CYP46A1Q9Y6A2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CYP46A1Q9Y6A2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
CYP46A1Q9Y6A2 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CYP46A1Q9Y6A2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
CYP46A1Q9Y6A2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CYP46A1Q9Y6A2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC22.42■■□□□ 1.18
CYP46A1Q9Y6A2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
CYP46A1Q9Y6A2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
CYP46A1Q9Y6A2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC22.42■■□□□ 1.18
CYP46A1Q9Y6A2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms