Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF11Q9Y3C5 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF11Q9Y3C5 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF11Q9Y3C5 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF11Q9Y3C5 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF11Q9Y3C5 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF11Q9Y3C5 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF11Q9Y3C5 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.46■□□□□ 0.55
RNF11Q9Y3C5 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
RNF11Q9Y3C5 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF11Q9Y3C5 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF11Q9Y3C5 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF11Q9Y3C5 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF11Q9Y3C5 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF11Q9Y3C5 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF11Q9Y3C5 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
RNF11Q9Y3C5 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF11Q9Y3C5 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF11Q9Y3C5 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF11Q9Y3C5 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RNF11Q9Y3C5 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RNF11Q9Y3C5 TSPY23P-201ENST00000440136 739 ntBASIC18.46■□□□□ 0.55
RNF11Q9Y3C5 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RNF11Q9Y3C5 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.46■□□□□ 0.55
RNF11Q9Y3C5 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF11Q9Y3C5 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF11Q9Y3C5 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF11Q9Y3C5 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF11Q9Y3C5 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF11Q9Y3C5 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF11Q9Y3C5 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF11Q9Y3C5 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
RNF11Q9Y3C5 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
RNF11Q9Y3C5 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF11Q9Y3C5 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF11Q9Y3C5 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF11Q9Y3C5 KRT8P41-201ENST00000533985 1514 ntBASIC18.45■□□□□ 0.54
RNF11Q9Y3C5 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
RNF11Q9Y3C5 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF11Q9Y3C5 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
RNF11Q9Y3C5 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF11Q9Y3C5 TSPY21P-201ENST00000433481 731 ntBASIC18.45■□□□□ 0.54
RNF11Q9Y3C5 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.45■□□□□ 0.54
RNF11Q9Y3C5 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.45■□□□□ 0.54
RNF11Q9Y3C5 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF11Q9Y3C5 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RNF11Q9Y3C5 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.45■□□□□ 0.54
RNF11Q9Y3C5 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF11Q9Y3C5 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF11Q9Y3C5 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF11Q9Y3C5 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RNF11Q9Y3C5 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
RNF11Q9Y3C5 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF11Q9Y3C5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF11Q9Y3C5 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF11Q9Y3C5 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF11Q9Y3C5 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF11Q9Y3C5 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF11Q9Y3C5 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF11Q9Y3C5 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF11Q9Y3C5 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF11Q9Y3C5 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF11Q9Y3C5 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF11Q9Y3C5 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF11Q9Y3C5 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF11Q9Y3C5 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF11Q9Y3C5 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF11Q9Y3C5 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF11Q9Y3C5 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF11Q9Y3C5 POU5F1P3-201ENST00000428824 1078 ntBASIC18.44■□□□□ 0.54
RNF11Q9Y3C5 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.44■□□□□ 0.54
RNF11Q9Y3C5 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF11Q9Y3C5 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF11Q9Y3C5 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF11Q9Y3C5 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF11Q9Y3C5 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.44■□□□□ 0.54
RNF11Q9Y3C5 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF11Q9Y3C5 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF11Q9Y3C5 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF11Q9Y3C5 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF11Q9Y3C5 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RNF11Q9Y3C5 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.44■□□□□ 0.54
RNF11Q9Y3C5 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF11Q9Y3C5 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF11Q9Y3C5 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF11Q9Y3C5 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF11Q9Y3C5 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF11Q9Y3C5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF11Q9Y3C5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF11Q9Y3C5 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF11Q9Y3C5 FZD10-202ENST00000539839 3282 ntBASIC18.43■□□□□ 0.54
RNF11Q9Y3C5 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
RNF11Q9Y3C5 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
RNF11Q9Y3C5 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF11Q9Y3C5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF11Q9Y3C5 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF11Q9Y3C5 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
RNF11Q9Y3C5 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RNF11Q9Y3C5 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF11Q9Y3C5 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms