Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC29.23■■■□□ 2.27
CDK11AQ9UQ88 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC29.23■■■□□ 2.27
CDK11AQ9UQ88 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC29.23■■■□□ 2.27
CDK11AQ9UQ88 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
CDK11AQ9UQ88 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC29.23■■■□□ 2.27
CDK11AQ9UQ88 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC29.23■■■□□ 2.27
CDK11AQ9UQ88 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC29.23■■■□□ 2.27
CDK11AQ9UQ88 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC29.22■■■□□ 2.27
CDK11AQ9UQ88 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC29.22■■■□□ 2.27
CDK11AQ9UQ88 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CDK11AQ9UQ88 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
CDK11AQ9UQ88 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CDK11AQ9UQ88 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CDK11AQ9UQ88 RNF126P1-202ENST00000569893 925 ntBASIC29.22■■■□□ 2.27
CDK11AQ9UQ88 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC29.22■■■□□ 2.27
CDK11AQ9UQ88 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
CDK11AQ9UQ88 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CDK11AQ9UQ88 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC29.22■■■□□ 2.27
CDK11AQ9UQ88 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CDK11AQ9UQ88 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
CDK11AQ9UQ88 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CDK11AQ9UQ88 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
CDK11AQ9UQ88 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC29.22■■■□□ 2.27
CDK11AQ9UQ88 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC29.22■■■□□ 2.27
CDK11AQ9UQ88 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC29.21■■■□□ 2.27
CDK11AQ9UQ88 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CDK11AQ9UQ88 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
CDK11AQ9UQ88 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC29.21■■■□□ 2.27
CDK11AQ9UQ88 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC29.21■■■□□ 2.27
CDK11AQ9UQ88 BAALC-202ENST00000306391 243 ntTSL 5 BASIC29.21■■■□□ 2.27
CDK11AQ9UQ88 BAALC-204ENST00000330955 222 ntTSL 5 BASIC29.21■■■□□ 2.27
CDK11AQ9UQ88 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CDK11AQ9UQ88 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC29.21■■■□□ 2.27
CDK11AQ9UQ88 TSPY19P-201ENST00000418461 509 ntBASIC29.21■■■□□ 2.27
CDK11AQ9UQ88 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC29.21■■■□□ 2.27
CDK11AQ9UQ88 KRT18P23-201ENST00000435622 1283 ntBASIC29.21■■■□□ 2.27
CDK11AQ9UQ88 TSPY18P-201ENST00000441642 509 ntBASIC29.21■■■□□ 2.27
CDK11AQ9UQ88 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC29.21■■■□□ 2.27
CDK11AQ9UQ88 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC29.21■■■□□ 2.27
CDK11AQ9UQ88 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
CDK11AQ9UQ88 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC29.21■■■□□ 2.27
CDK11AQ9UQ88 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
CDK11AQ9UQ88 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC29.21■■■□□ 2.27
CDK11AQ9UQ88 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC29.21■■■□□ 2.27
CDK11AQ9UQ88 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC29.21■■■□□ 2.27
CDK11AQ9UQ88 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC29.2■■■□□ 2.27
CDK11AQ9UQ88 KRT8P10-201ENST00000450021 1447 ntBASIC29.2■■■□□ 2.27
CDK11AQ9UQ88 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.27
CDK11AQ9UQ88 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
CDK11AQ9UQ88 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC29.2■■■□□ 2.27
CDK11AQ9UQ88 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
CDK11AQ9UQ88 AC010240.3-201ENST00000607688 395 ntBASIC29.2■■■□□ 2.26
CDK11AQ9UQ88 LITAF-220ENST00000620789 692 ntTSL 5 BASIC29.2■■■□□ 2.26
CDK11AQ9UQ88 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
CDK11AQ9UQ88 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
CDK11AQ9UQ88 AL512353.2-201ENST00000448759 1962 ntBASIC29.2■■■□□ 2.26
CDK11AQ9UQ88 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
CDK11AQ9UQ88 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
CDK11AQ9UQ88 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
CDK11AQ9UQ88 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
CDK11AQ9UQ88 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
CDK11AQ9UQ88 RCC2P3-201ENST00000418112 1537 ntBASIC29.2■■■□□ 2.26
CDK11AQ9UQ88 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CDK11AQ9UQ88 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CDK11AQ9UQ88 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC29.19■■■□□ 2.26
CDK11AQ9UQ88 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CDK11AQ9UQ88 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CDK11AQ9UQ88 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CDK11AQ9UQ88 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC29.19■■■□□ 2.26
CDK11AQ9UQ88 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC29.19■■■□□ 2.26
CDK11AQ9UQ88 CIB2-208ENST00000560618 804 ntTSL 2 BASIC29.19■■■□□ 2.26
CDK11AQ9UQ88 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC29.19■■■□□ 2.26
CDK11AQ9UQ88 IFNL4P1-201ENST00000607083 540 ntBASIC29.19■■■□□ 2.26
CDK11AQ9UQ88 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC29.19■■■□□ 2.26
CDK11AQ9UQ88 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC29.19■■■□□ 2.26
CDK11AQ9UQ88 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CDK11AQ9UQ88 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CDK11AQ9UQ88 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC29.19■■■□□ 2.26
CDK11AQ9UQ88 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC29.19■■■□□ 2.26
CDK11AQ9UQ88 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
CDK11AQ9UQ88 TP73-202ENST00000354437 2140 ntTSL 5 BASIC29.18■■■□□ 2.26
CDK11AQ9UQ88 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
CDK11AQ9UQ88 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC29.18■■■□□ 2.26
CDK11AQ9UQ88 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
CDK11AQ9UQ88 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC29.18■■■□□ 2.26
CDK11AQ9UQ88 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC29.18■■■□□ 2.26
CDK11AQ9UQ88 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC29.18■■■□□ 2.26
CDK11AQ9UQ88 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC29.18■■■□□ 2.26
CDK11AQ9UQ88 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC29.18■■■□□ 2.26
CDK11AQ9UQ88 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
CDK11AQ9UQ88 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC29.18■■■□□ 2.26
CDK11AQ9UQ88 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC29.18■■■□□ 2.26
CDK11AQ9UQ88 Z82202.1-201ENST00000623446 1880 ntBASIC29.18■■■□□ 2.26
CDK11AQ9UQ88 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
CDK11AQ9UQ88 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CDK11AQ9UQ88 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
CDK11AQ9UQ88 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC29.17■■■□□ 2.26
CDK11AQ9UQ88 AC008556.1-201ENST00000610908 2040 ntBASIC29.17■■■□□ 2.26
CDK11AQ9UQ88 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC29.17■■■□□ 2.26
CDK11AQ9UQ88 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC29.17■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms