Protein–RNA interactions for Protein: Q9UPU3

SORCS3, VPS10 domain-containing receptor SorCS3, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORCS3Q9UPU3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SORCS3Q9UPU3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.94■□□□□ 0.78
SORCS3Q9UPU3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SORCS3Q9UPU3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SORCS3Q9UPU3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SORCS3Q9UPU3 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SORCS3Q9UPU3 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SORCS3Q9UPU3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SORCS3Q9UPU3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.93■□□□□ 0.78
SORCS3Q9UPU3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SORCS3Q9UPU3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SORCS3Q9UPU3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SORCS3Q9UPU3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SORCS3Q9UPU3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SORCS3Q9UPU3 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SORCS3Q9UPU3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.93■□□□□ 0.78
SORCS3Q9UPU3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.93■□□□□ 0.78
SORCS3Q9UPU3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.93■□□□□ 0.78
SORCS3Q9UPU3 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.93■□□□□ 0.78
SORCS3Q9UPU3 CKBP1-201ENST00000565489 1086 ntBASIC19.93■□□□□ 0.78
SORCS3Q9UPU3 AL160286.2-201ENST00000567150 934 ntBASIC19.93■□□□□ 0.78
SORCS3Q9UPU3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.93■□□□□ 0.78
SORCS3Q9UPU3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.93■□□□□ 0.78
SORCS3Q9UPU3 CR769767.2-201ENST00000622735 460 ntBASIC19.93■□□□□ 0.78
SORCS3Q9UPU3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
SORCS3Q9UPU3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.93■□□□□ 0.78
SORCS3Q9UPU3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SORCS3Q9UPU3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SORCS3Q9UPU3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SORCS3Q9UPU3 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SORCS3Q9UPU3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SORCS3Q9UPU3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
SORCS3Q9UPU3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SORCS3Q9UPU3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.92■□□□□ 0.78
SORCS3Q9UPU3 TMEM179-206ENST00000616017 1645 ntBASIC19.92■□□□□ 0.78
SORCS3Q9UPU3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SORCS3Q9UPU3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SORCS3Q9UPU3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SORCS3Q9UPU3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SORCS3Q9UPU3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SORCS3Q9UPU3 FAAHP1-202ENST00000446499 1238 ntBASIC19.92■□□□□ 0.78
SORCS3Q9UPU3 KRT17P6-201ENST00000453795 1220 ntBASIC19.92■□□□□ 0.78
SORCS3Q9UPU3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.92■□□□□ 0.78
SORCS3Q9UPU3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
SORCS3Q9UPU3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SORCS3Q9UPU3 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.92■□□□□ 0.78
SORCS3Q9UPU3 GPALPP1-207ENST00000611650 899 ntBASIC19.92■□□□□ 0.78
SORCS3Q9UPU3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SORCS3Q9UPU3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SORCS3Q9UPU3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SORCS3Q9UPU3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.92■□□□□ 0.78
SORCS3Q9UPU3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SORCS3Q9UPU3 KRT8P8-201ENST00000434750 1448 ntBASIC19.92■□□□□ 0.78
SORCS3Q9UPU3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SORCS3Q9UPU3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.92■□□□□ 0.78
SORCS3Q9UPU3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SORCS3Q9UPU3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SORCS3Q9UPU3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SORCS3Q9UPU3 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SORCS3Q9UPU3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SORCS3Q9UPU3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.91■□□□□ 0.78
SORCS3Q9UPU3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SORCS3Q9UPU3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.91■□□□□ 0.78
SORCS3Q9UPU3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SORCS3Q9UPU3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.91■□□□□ 0.78
SORCS3Q9UPU3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.91■□□□□ 0.78
SORCS3Q9UPU3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SORCS3Q9UPU3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.91■□□□□ 0.78
SORCS3Q9UPU3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SORCS3Q9UPU3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SORCS3Q9UPU3 AL845331.1-201ENST00000424978 1190 ntBASIC19.91■□□□□ 0.78
SORCS3Q9UPU3 AP000347.1-202ENST00000435868 847 ntBASIC19.91■□□□□ 0.78
SORCS3Q9UPU3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.91■□□□□ 0.78
SORCS3Q9UPU3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SORCS3Q9UPU3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.91■□□□□ 0.78
SORCS3Q9UPU3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.91■□□□□ 0.78
SORCS3Q9UPU3 AC092329.2-201ENST00000598402 547 ntBASIC19.91■□□□□ 0.78
SORCS3Q9UPU3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.91■□□□□ 0.78
SORCS3Q9UPU3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SORCS3Q9UPU3 KRT8P10-201ENST00000450021 1447 ntBASIC19.91■□□□□ 0.78
SORCS3Q9UPU3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SORCS3Q9UPU3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SORCS3Q9UPU3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.91■□□□□ 0.78
SORCS3Q9UPU3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SORCS3Q9UPU3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SORCS3Q9UPU3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SORCS3Q9UPU3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
SORCS3Q9UPU3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SORCS3Q9UPU3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SORCS3Q9UPU3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
SORCS3Q9UPU3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SORCS3Q9UPU3 AC125437.2-201ENST00000625180 2167 ntBASIC19.9■□□□□ 0.78
SORCS3Q9UPU3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SORCS3Q9UPU3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SORCS3Q9UPU3 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.9■□□□□ 0.78
SORCS3Q9UPU3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.9■□□□□ 0.78
SORCS3Q9UPU3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.9■□□□□ 0.78
SORCS3Q9UPU3 GCSHP2-201ENST00000560971 527 ntBASIC19.9■□□□□ 0.78
SORCS3Q9UPU3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SORCS3Q9UPU3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms