Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NECTIN3Q9NQS3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.14■□□□□ 0.49
NECTIN3Q9NQS3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.14■□□□□ 0.49
NECTIN3Q9NQS3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.14■□□□□ 0.49
NECTIN3Q9NQS3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.14■□□□□ 0.49
NECTIN3Q9NQS3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NECTIN3Q9NQS3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NECTIN3Q9NQS3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NECTIN3Q9NQS3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NECTIN3Q9NQS3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NECTIN3Q9NQS3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
NECTIN3Q9NQS3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.14■□□□□ 0.49
NECTIN3Q9NQS3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NECTIN3Q9NQS3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NECTIN3Q9NQS3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.14■□□□□ 0.49
NECTIN3Q9NQS3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NECTIN3Q9NQS3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NECTIN3Q9NQS3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 ZNF815P-204ENST00000434898 1737 ntBASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 AC104417.2-201ENST00000562989 1793 ntBASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 AC020916.1-201ENST00000587762 1774 ntBASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 AC011506.1-201ENST00000474329 610 ntBASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 AL355075.4-201ENST00000554988 638 ntBASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 REXO1L10P-201ENST00000615707 1290 ntBASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 REXO1L12P-201ENST00000622156 912 ntBASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NECTIN3Q9NQS3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 MESTP1-201ENST00000404287 994 ntBASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 Z85996.1-201ENST00000494644 937 ntBASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 AC116562.2-201ENST00000507042 360 ntBASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 AC026271.3-201ENST00000571884 352 ntBASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NECTIN3Q9NQS3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
NECTIN3Q9NQS3 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.11■□□□□ 0.49
NECTIN3Q9NQS3 B3GAT3P1-201ENST00000471720 806 ntBASIC18.11■□□□□ 0.49
NECTIN3Q9NQS3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.11■□□□□ 0.49
NECTIN3Q9NQS3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.11■□□□□ 0.49
NECTIN3Q9NQS3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NECTIN3Q9NQS3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.11■□□□□ 0.49
NECTIN3Q9NQS3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.11■□□□□ 0.49
NECTIN3Q9NQS3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.11■□□□□ 0.49
NECTIN3Q9NQS3 MIR6786-201ENST00000616843 113 ntBASIC18.11■□□□□ 0.49
NECTIN3Q9NQS3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
NECTIN3Q9NQS3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.11■□□□□ 0.49
NECTIN3Q9NQS3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
NECTIN3Q9NQS3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms