Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SH2D4AQ9H788 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SH2D4AQ9H788 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SH2D4AQ9H788 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SH2D4AQ9H788 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SH2D4AQ9H788 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC22.05■■□□□ 1.12
SH2D4AQ9H788 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC22.05■■□□□ 1.12
SH2D4AQ9H788 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SH2D4AQ9H788 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SH2D4AQ9H788 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SH2D4AQ9H788 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC22.04■■□□□ 1.12
SH2D4AQ9H788 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
SH2D4AQ9H788 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SH2D4AQ9H788 AC036111.1-201ENST00000533973 1582 ntBASIC22.04■■□□□ 1.12
SH2D4AQ9H788 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC22.04■■□□□ 1.12
SH2D4AQ9H788 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SH2D4AQ9H788 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
SH2D4AQ9H788 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SH2D4AQ9H788 COPS8-203ENST00000409334 794 ntTSL 5 BASIC22.04■■□□□ 1.12
SH2D4AQ9H788 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SH2D4AQ9H788 AL136038.3-201ENST00000561909 1096 ntBASIC22.04■■□□□ 1.12
SH2D4AQ9H788 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SH2D4AQ9H788 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SH2D4AQ9H788 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SH2D4AQ9H788 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
SH2D4AQ9H788 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SH2D4AQ9H788 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SH2D4AQ9H788 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.04■■□□□ 1.12
SH2D4AQ9H788 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SH2D4AQ9H788 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC22.04■■□□□ 1.12
SH2D4AQ9H788 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SH2D4AQ9H788 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 LY6E-213ENST00000522528 606 ntTSL 3 BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 VENTXP5-201ENST00000523979 775 ntBASIC22.03■■□□□ 1.12
SH2D4AQ9H788 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 ZNF444P1-201ENST00000559497 298 ntBASIC22.03■■□□□ 1.12
SH2D4AQ9H788 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 AC005332.1-201ENST00000577698 1310 ntBASIC22.03■■□□□ 1.12
SH2D4AQ9H788 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC22.03■■□□□ 1.12
SH2D4AQ9H788 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SH2D4AQ9H788 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SH2D4AQ9H788 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC22.02■■□□□ 1.12
SH2D4AQ9H788 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SH2D4AQ9H788 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC22.02■■□□□ 1.12
SH2D4AQ9H788 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SH2D4AQ9H788 SPDYE15P-201ENST00000424157 909 ntBASIC22.02■■□□□ 1.12
SH2D4AQ9H788 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC22.02■■□□□ 1.12
SH2D4AQ9H788 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC22.02■■□□□ 1.12
SH2D4AQ9H788 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SH2D4AQ9H788 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
SH2D4AQ9H788 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC22.02■■□□□ 1.12
SH2D4AQ9H788 FGF14-AS2-201ENST00000606448 1074 ntBASIC22.02■■□□□ 1.12
SH2D4AQ9H788 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC22.02■■□□□ 1.12
SH2D4AQ9H788 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SH2D4AQ9H788 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
SH2D4AQ9H788 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SH2D4AQ9H788 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC22.02■■□□□ 1.12
SH2D4AQ9H788 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC22.01■■□□□ 1.11
SH2D4AQ9H788 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SH2D4AQ9H788 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
SH2D4AQ9H788 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SH2D4AQ9H788 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
SH2D4AQ9H788 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SH2D4AQ9H788 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC22.01■■□□□ 1.11
SH2D4AQ9H788 LINC01311-201ENST00000565162 1445 ntBASIC22.01■■□□□ 1.11
SH2D4AQ9H788 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SH2D4AQ9H788 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SH2D4AQ9H788 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SH2D4AQ9H788 GRAMD4P1-201ENST00000435181 1110 ntBASIC22.01■■□□□ 1.11
SH2D4AQ9H788 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC22.01■■□□□ 1.11
SH2D4AQ9H788 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SH2D4AQ9H788 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC22.01■■□□□ 1.11
SH2D4AQ9H788 AC083849.1-201ENST00000615227 514 ntBASIC22.01■■□□□ 1.11
SH2D4AQ9H788 AC116407.4-201ENST00000623319 1061 ntBASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms