Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 SLC25A1P2-201ENST00000430693 912 ntBASIC20.96■□□□□ 0.95
CCDC113Q9H0I3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.96■□□□□ 0.95
CCDC113Q9H0I3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC113Q9H0I3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.96■□□□□ 0.95
CCDC113Q9H0I3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
CCDC113Q9H0I3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC113Q9H0I3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC113Q9H0I3 FAM87A-204ENST00000613235 858 ntBASIC20.96■□□□□ 0.95
CCDC113Q9H0I3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC113Q9H0I3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC113Q9H0I3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CCDC113Q9H0I3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC113Q9H0I3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC113Q9H0I3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC113Q9H0I3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC113Q9H0I3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.96■□□□□ 0.95
CCDC113Q9H0I3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC113Q9H0I3 TEX21P-204ENST00000641479 1693 ntBASIC20.96■□□□□ 0.95
CCDC113Q9H0I3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
CCDC113Q9H0I3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC113Q9H0I3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CCDC113Q9H0I3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC113Q9H0I3 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CCDC113Q9H0I3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC113Q9H0I3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC113Q9H0I3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC113Q9H0I3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC113Q9H0I3 RCN1P1-201ENST00000400413 996 ntBASIC20.95■□□□□ 0.94
CCDC113Q9H0I3 CA15P1-201ENST00000481698 905 ntBASIC20.95■□□□□ 0.94
CCDC113Q9H0I3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC113Q9H0I3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CCDC113Q9H0I3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC113Q9H0I3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC113Q9H0I3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC113Q9H0I3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.95■□□□□ 0.94
CCDC113Q9H0I3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC113Q9H0I3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC113Q9H0I3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.95■□□□□ 0.94
CCDC113Q9H0I3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC113Q9H0I3 AC092338.2-201ENST00000568827 1415 ntBASIC20.95■□□□□ 0.94
CCDC113Q9H0I3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC113Q9H0I3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.94■□□□□ 0.94
CCDC113Q9H0I3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC113Q9H0I3 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC113Q9H0I3 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.94■□□□□ 0.94
CCDC113Q9H0I3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC113Q9H0I3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC113Q9H0I3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC113Q9H0I3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC113Q9H0I3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC113Q9H0I3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.94■□□□□ 0.94
CCDC113Q9H0I3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC113Q9H0I3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.94■□□□□ 0.94
CCDC113Q9H0I3 ECEL1P2-202ENST00000465689 757 ntBASIC20.94■□□□□ 0.94
CCDC113Q9H0I3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC113Q9H0I3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.94■□□□□ 0.94
CCDC113Q9H0I3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.94■□□□□ 0.94
CCDC113Q9H0I3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CCDC113Q9H0I3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC113Q9H0I3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CCDC113Q9H0I3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC113Q9H0I3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CCDC113Q9H0I3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC113Q9H0I3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC113Q9H0I3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
CCDC113Q9H0I3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC113Q9H0I3 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC113Q9H0I3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC113Q9H0I3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC113Q9H0I3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
CCDC113Q9H0I3 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC113Q9H0I3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC113Q9H0I3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CCDC113Q9H0I3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC113Q9H0I3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC113Q9H0I3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.93■□□□□ 0.94
CCDC113Q9H0I3 SLC25A3P1-201ENST00000443844 931 ntBASIC20.93■□□□□ 0.94
CCDC113Q9H0I3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
CCDC113Q9H0I3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC113Q9H0I3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC113Q9H0I3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC113Q9H0I3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC113Q9H0I3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC113Q9H0I3 AC090340.1-201ENST00000620778 4980 ntBASIC20.93■□□□□ 0.94
CCDC113Q9H0I3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC113Q9H0I3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CCDC113Q9H0I3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC113Q9H0I3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC113Q9H0I3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC113Q9H0I3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC113Q9H0I3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC113Q9H0I3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CCDC113Q9H0I3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC113Q9H0I3 AC113347.1-201ENST00000413321 391 ntBASIC20.92■□□□□ 0.94
CCDC113Q9H0I3 AC007663.1-201ENST00000438948 1240 ntBASIC20.92■□□□□ 0.94
CCDC113Q9H0I3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.92■□□□□ 0.94
CCDC113Q9H0I3 FAM210CP-201ENST00000445714 574 ntBASIC20.92■□□□□ 0.94
CCDC113Q9H0I3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC113Q9H0I3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC113Q9H0I3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms