Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN23Q96B33 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN23Q96B33 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN23Q96B33 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN23Q96B33 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN23Q96B33 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN23Q96B33 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN23Q96B33 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN23Q96B33 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CLDN23Q96B33 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN23Q96B33 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.91■□□□□ 0.62
CLDN23Q96B33 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN23Q96B33 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN23Q96B33 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.91■□□□□ 0.62
CLDN23Q96B33 GPR32P1-201ENST00000601788 811 ntBASIC18.91■□□□□ 0.62
CLDN23Q96B33 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.91■□□□□ 0.62
CLDN23Q96B33 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN23Q96B33 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN23Q96B33 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN23Q96B33 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN23Q96B33 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN23Q96B33 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.91■□□□□ 0.62
CLDN23Q96B33 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN23Q96B33 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CLDN23Q96B33 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CLDN23Q96B33 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN23Q96B33 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.9■□□□□ 0.62
CLDN23Q96B33 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CLDN23Q96B33 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CLDN23Q96B33 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN23Q96B33 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CLDN23Q96B33 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN23Q96B33 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN23Q96B33 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN23Q96B33 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN23Q96B33 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN23Q96B33 KRT18P13-201ENST00000400056 1290 ntBASIC18.9■□□□□ 0.62
CLDN23Q96B33 RN7SL606P-201ENST00000472779 293 ntBASIC18.9■□□□□ 0.62
CLDN23Q96B33 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CLDN23Q96B33 AF238378.1-201ENST00000526806 358 ntBASIC18.9■□□□□ 0.62
CLDN23Q96B33 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.9■□□□□ 0.62
CLDN23Q96B33 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.9■□□□□ 0.62
CLDN23Q96B33 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.9■□□□□ 0.62
CLDN23Q96B33 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN23Q96B33 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN23Q96B33 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN23Q96B33 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN23Q96B33 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CLDN23Q96B33 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN23Q96B33 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.89■□□□□ 0.62
CLDN23Q96B33 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.89■□□□□ 0.62
CLDN23Q96B33 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CLDN23Q96B33 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN23Q96B33 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CLDN23Q96B33 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.89■□□□□ 0.61
CLDN23Q96B33 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CLDN23Q96B33 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.89■□□□□ 0.61
CLDN23Q96B33 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CLDN23Q96B33 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CLDN23Q96B33 AP001005.1-201ENST00000571755 1248 ntBASIC18.89■□□□□ 0.61
CLDN23Q96B33 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN23Q96B33 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.89■□□□□ 0.61
CLDN23Q96B33 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN23Q96B33 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.89■□□□□ 0.61
CLDN23Q96B33 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN23Q96B33 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN23Q96B33 IL9RP2-201ENST00000423948 1312 ntBASIC18.89■□□□□ 0.61
CLDN23Q96B33 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN23Q96B33 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN23Q96B33 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN23Q96B33 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN23Q96B33 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.88■□□□□ 0.61
CLDN23Q96B33 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.88■□□□□ 0.61
CLDN23Q96B33 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
CLDN23Q96B33 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN23Q96B33 AC073314.1-201ENST00000568729 2216 ntBASIC18.88■□□□□ 0.61
CLDN23Q96B33 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN23Q96B33 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN23Q96B33 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN23Q96B33 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN23Q96B33 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN23Q96B33 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.88■□□□□ 0.61
CLDN23Q96B33 IGHGP-201ENST00000390555 1178 ntBASIC18.88■□□□□ 0.61
CLDN23Q96B33 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.88■□□□□ 0.61
CLDN23Q96B33 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.88■□□□□ 0.61
CLDN23Q96B33 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.88■□□□□ 0.61
CLDN23Q96B33 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CLDN23Q96B33 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.88■□□□□ 0.61
CLDN23Q96B33 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.88■□□□□ 0.61
CLDN23Q96B33 AL592071.1-201ENST00000611956 408 ntBASIC18.88■□□□□ 0.61
CLDN23Q96B33 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN23Q96B33 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CLDN23Q96B33 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN23Q96B33 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN23Q96B33 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN23Q96B33 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN23Q96B33 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.88■□□□□ 0.61
CLDN23Q96B33 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN23Q96B33 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN23Q96B33 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms