Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE4Q96A23 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE4Q96A23 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE4Q96A23 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.31
CPNE4Q96A23 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE4Q96A23 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE4Q96A23 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE4Q96A23 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.99■□□□□ 0.31
CPNE4Q96A23 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE4Q96A23 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.99■□□□□ 0.31
CPNE4Q96A23 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.99■□□□□ 0.31
CPNE4Q96A23 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.99■□□□□ 0.31
CPNE4Q96A23 AC012306.2-201ENST00000609350 630 ntBASIC16.99■□□□□ 0.31
CPNE4Q96A23 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.99■□□□□ 0.31
CPNE4Q96A23 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.99■□□□□ 0.31
CPNE4Q96A23 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE4Q96A23 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE4Q96A23 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE4Q96A23 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE4Q96A23 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE4Q96A23 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE4Q96A23 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.99■□□□□ 0.31
CPNE4Q96A23 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.99■□□□□ 0.31
CPNE4Q96A23 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.99■□□□□ 0.31
CPNE4Q96A23 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE4Q96A23 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.99■□□□□ 0.31
CPNE4Q96A23 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE4Q96A23 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CPNE4Q96A23 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE4Q96A23 IRX1P1-201ENST00000438849 1838 ntBASIC16.98■□□□□ 0.31
CPNE4Q96A23 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE4Q96A23 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.98■□□□□ 0.31
CPNE4Q96A23 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CPNE4Q96A23 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE4Q96A23 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.98■□□□□ 0.31
CPNE4Q96A23 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE4Q96A23 AC116562.4-201ENST00000641316 2276 ntBASIC16.98■□□□□ 0.31
CPNE4Q96A23 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE4Q96A23 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CPNE4Q96A23 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE4Q96A23 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE4Q96A23 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CPNE4Q96A23 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE4Q96A23 AC010653.2-201ENST00000623505 997 ntBASIC16.98■□□□□ 0.31
CPNE4Q96A23 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE4Q96A23 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE4Q96A23 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE4Q96A23 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE4Q96A23 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE4Q96A23 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.98■□□□□ 0.31
CPNE4Q96A23 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE4Q96A23 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CPNE4Q96A23 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.98■□□□□ 0.31
CPNE4Q96A23 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE4Q96A23 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE4Q96A23 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.98■□□□□ 0.31
CPNE4Q96A23 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CPNE4Q96A23 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE4Q96A23 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE4Q96A23 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.97■□□□□ 0.31
CPNE4Q96A23 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CPNE4Q96A23 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE4Q96A23 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE4Q96A23 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE4Q96A23 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE4Q96A23 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CPNE4Q96A23 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CPNE4Q96A23 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE4Q96A23 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CPNE4Q96A23 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.97■□□□□ 0.31
CPNE4Q96A23 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.97■□□□□ 0.31
CPNE4Q96A23 AL353719.1-201ENST00000566847 864 ntBASIC16.97■□□□□ 0.31
CPNE4Q96A23 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.97■□□□□ 0.31
CPNE4Q96A23 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CPNE4Q96A23 AL023803.3-201ENST00000615559 522 ntBASIC16.97■□□□□ 0.31
CPNE4Q96A23 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CPNE4Q96A23 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE4Q96A23 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.97■□□□□ 0.31
CPNE4Q96A23 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE4Q96A23 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE4Q96A23 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE4Q96A23 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE4Q96A23 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CPNE4Q96A23 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE4Q96A23 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE4Q96A23 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.97■□□□□ 0.31
CPNE4Q96A23 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE4Q96A23 HCG11-201ENST00000411553 5696 ntBASIC16.97■□□□□ 0.31
CPNE4Q96A23 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE4Q96A23 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CPNE4Q96A23 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CPNE4Q96A23 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE4Q96A23 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.97■□□□□ 0.31
CPNE4Q96A23 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE4Q96A23 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CPNE4Q96A23 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CPNE4Q96A23 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.97■□□□□ 0.31
CPNE4Q96A23 AC092338.2-201ENST00000568827 1415 ntBASIC16.96■□□□□ 0.31
CPNE4Q96A23 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CPNE4Q96A23 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms