Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 AC120498.9-201ENST00000339021 3867 ntBASIC18.8■□□□□ 0.6
SCAMP4Q969E2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCAMP4Q969E2 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCAMP4Q969E2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCAMP4Q969E2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.8■□□□□ 0.6
SCAMP4Q969E2 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.79■□□□□ 0.6
SCAMP4Q969E2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCAMP4Q969E2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.79■□□□□ 0.6
SCAMP4Q969E2 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SCAMP4Q969E2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SCAMP4Q969E2 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCAMP4Q969E2 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCAMP4Q969E2 FAM210CP-201ENST00000445714 574 ntBASIC18.79■□□□□ 0.6
SCAMP4Q969E2 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.79■□□□□ 0.6
SCAMP4Q969E2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCAMP4Q969E2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCAMP4Q969E2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCAMP4Q969E2 GPAT2P1-201ENST00000444924 1672 ntBASIC18.79■□□□□ 0.6
SCAMP4Q969E2 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SCAMP4Q969E2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SCAMP4Q969E2 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCAMP4Q969E2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
SCAMP4Q969E2 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SCAMP4Q969E2 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.78■□□□□ 0.6
SCAMP4Q969E2 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
SCAMP4Q969E2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCAMP4Q969E2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SCAMP4Q969E2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SCAMP4Q969E2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SCAMP4Q969E2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SCAMP4Q969E2 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.78■□□□□ 0.6
SCAMP4Q969E2 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.78■□□□□ 0.6
SCAMP4Q969E2 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.78■□□□□ 0.6
SCAMP4Q969E2 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCAMP4Q969E2 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SCAMP4Q969E2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
SCAMP4Q969E2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCAMP4Q969E2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
SCAMP4Q969E2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SCAMP4Q969E2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.78■□□□□ 0.6
SCAMP4Q969E2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.78■□□□□ 0.6
SCAMP4Q969E2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCAMP4Q969E2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.78■□□□□ 0.6
SCAMP4Q969E2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCAMP4Q969E2 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCAMP4Q969E2 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SCAMP4Q969E2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SCAMP4Q969E2 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.77■□□□□ 0.6
SCAMP4Q969E2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCAMP4Q969E2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.77■□□□□ 0.6
SCAMP4Q969E2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
SCAMP4Q969E2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCAMP4Q969E2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SCAMP4Q969E2 KRT8P45-201ENST00000414328 1447 ntBASIC18.77■□□□□ 0.6
SCAMP4Q969E2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCAMP4Q969E2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SCAMP4Q969E2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCAMP4Q969E2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.77■□□□□ 0.6
SCAMP4Q969E2 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.77■□□□□ 0.6
SCAMP4Q969E2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SCAMP4Q969E2 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCAMP4Q969E2 LIN28AP1-201ENST00000429574 405 ntBASIC18.77■□□□□ 0.6
SCAMP4Q969E2 ATP5G1P1-201ENST00000448724 379 ntBASIC18.77■□□□□ 0.6
SCAMP4Q969E2 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.77■□□□□ 0.6
SCAMP4Q969E2 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.77■□□□□ 0.6
SCAMP4Q969E2 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
SCAMP4Q969E2 AC092865.7-201ENST00000641832 219 ntBASIC18.77■□□□□ 0.6
SCAMP4Q969E2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SCAMP4Q969E2 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCAMP4Q969E2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SCAMP4Q969E2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.77■□□□□ 0.6
SCAMP4Q969E2 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SCAMP4Q969E2 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SCAMP4Q969E2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SCAMP4Q969E2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCAMP4Q969E2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCAMP4Q969E2 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCAMP4Q969E2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.76■□□□□ 0.59
SCAMP4Q969E2 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.76■□□□□ 0.59
SCAMP4Q969E2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.76■□□□□ 0.59
SCAMP4Q969E2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SCAMP4Q969E2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.76■□□□□ 0.59
SCAMP4Q969E2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.76■□□□□ 0.59
SCAMP4Q969E2 AL512353.2-201ENST00000448759 1962 ntBASIC18.76■□□□□ 0.59
SCAMP4Q969E2 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SCAMP4Q969E2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCAMP4Q969E2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCAMP4Q969E2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.76■□□□□ 0.59
SCAMP4Q969E2 AL023284.2-201ENST00000405850 579 ntBASIC18.76■□□□□ 0.59
SCAMP4Q969E2 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.76■□□□□ 0.59
SCAMP4Q969E2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SCAMP4Q969E2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.76■□□□□ 0.59
SCAMP4Q969E2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.76■□□□□ 0.59
SCAMP4Q969E2 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.76■□□□□ 0.59
SCAMP4Q969E2 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.76■□□□□ 0.59
SCAMP4Q969E2 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.76■□□□□ 0.59
SCAMP4Q969E2 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SCAMP4Q969E2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SCAMP4Q969E2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.76■□□□□ 0.59
SCAMP4Q969E2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms