Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
GCN1Q92616 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GCN1Q92616 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GCN1Q92616 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GCN1Q92616 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.53■□□□□ 0.24
GCN1Q92616 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GCN1Q92616 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
GCN1Q92616 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GCN1Q92616 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GCN1Q92616 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
GCN1Q92616 IGHGP-201ENST00000390555 1178 ntBASIC16.53■□□□□ 0.24
GCN1Q92616 AP002414.1-201ENST00000391405 1147 ntBASIC16.53■□□□□ 0.24
GCN1Q92616 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
GCN1Q92616 ELL2P1-201ENST00000413990 1906 ntBASIC16.53■□□□□ 0.24
GCN1Q92616 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
GCN1Q92616 AC021087.4-201ENST00000563761 564 ntBASIC16.53■□□□□ 0.24
GCN1Q92616 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.53■□□□□ 0.24
GCN1Q92616 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.53■□□□□ 0.24
GCN1Q92616 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
GCN1Q92616 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.53■□□□□ 0.24
GCN1Q92616 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GCN1Q92616 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.53■□□□□ 0.24
GCN1Q92616 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
GCN1Q92616 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
GCN1Q92616 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GCN1Q92616 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.53■□□□□ 0.24
GCN1Q92616 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GCN1Q92616 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
GCN1Q92616 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
GCN1Q92616 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.53■□□□□ 0.24
GCN1Q92616 RNA5SP421-201ENST00000516864 134 ntBASIC16.53■□□□□ 0.24
GCN1Q92616 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.53■□□□□ 0.24
GCN1Q92616 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.53■□□□□ 0.24
GCN1Q92616 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.53■□□□□ 0.24
GCN1Q92616 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.53■□□□□ 0.24
GCN1Q92616 AC025062.2-201ENST00000605477 670 ntBASIC16.53■□□□□ 0.24
GCN1Q92616 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.53■□□□□ 0.24
GCN1Q92616 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.52■□□□□ 0.24
GCN1Q92616 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
GCN1Q92616 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GCN1Q92616 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GCN1Q92616 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
GCN1Q92616 PMS2P4-201ENST00000412466 1052 ntBASIC16.52■□□□□ 0.24
GCN1Q92616 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.52■□□□□ 0.24
GCN1Q92616 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
GCN1Q92616 AC011840.4-201ENST00000578471 627 ntBASIC16.52■□□□□ 0.24
GCN1Q92616 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.52■□□□□ 0.24
GCN1Q92616 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
GCN1Q92616 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GCN1Q92616 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
GCN1Q92616 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
GCN1Q92616 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.52■□□□□ 0.23
GCN1Q92616 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GCN1Q92616 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GCN1Q92616 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
GCN1Q92616 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
GCN1Q92616 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC16.52■□□□□ 0.23
GCN1Q92616 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GCN1Q92616 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GCN1Q92616 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.52■□□□□ 0.23
GCN1Q92616 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.52■□□□□ 0.23
GCN1Q92616 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GCN1Q92616 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
GCN1Q92616 ARSEP1-201ENST00000420443 635 ntBASIC16.52■□□□□ 0.23
GCN1Q92616 MKNK2P1-201ENST00000437526 628 ntBASIC16.52■□□□□ 0.23
GCN1Q92616 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.52■□□□□ 0.23
GCN1Q92616 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
GCN1Q92616 AC092910.1-201ENST00000482027 1129 ntBASIC16.52■□□□□ 0.23
GCN1Q92616 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.52■□□□□ 0.23
GCN1Q92616 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.52■□□□□ 0.23
GCN1Q92616 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.52■□□□□ 0.23
GCN1Q92616 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GCN1Q92616 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GCN1Q92616 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
GCN1Q92616 AC005229.4-201ENST00000610085 2198 ntBASIC16.51■□□□□ 0.23
GCN1Q92616 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.51■□□□□ 0.23
GCN1Q92616 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GCN1Q92616 PHGDH-210ENST00000641115 1638 ntBASIC16.51■□□□□ 0.23
GCN1Q92616 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GCN1Q92616 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.51■□□□□ 0.23
GCN1Q92616 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.51■□□□□ 0.23
GCN1Q92616 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.51■□□□□ 0.23
GCN1Q92616 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
GCN1Q92616 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
GCN1Q92616 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GCN1Q92616 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GCN1Q92616 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.51■□□□□ 0.23
GCN1Q92616 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
GCN1Q92616 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.51■□□□□ 0.23
GCN1Q92616 AC073592.5-201ENST00000624854 528 ntBASIC16.51■□□□□ 0.23
GCN1Q92616 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GCN1Q92616 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
GCN1Q92616 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
GCN1Q92616 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.51■□□□□ 0.23
GCN1Q92616 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
GCN1Q92616 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
GCN1Q92616 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.5■□□□□ 0.23
GCN1Q92616 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.5■□□□□ 0.23
GCN1Q92616 AC009947.1-201ENST00000444350 727 ntBASIC16.5■□□□□ 0.23
GCN1Q92616 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms