Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 AC083906.6-201ENST00000641366 219 ntBASIC17.72■□□□□ 0.43
NUP43Q8NFH3 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.72■□□□□ 0.43
NUP43Q8NFH3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.71■□□□□ 0.43
NUP43Q8NFH3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.71■□□□□ 0.43
NUP43Q8NFH3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUP43Q8NFH3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUP43Q8NFH3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUP43Q8NFH3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
NUP43Q8NFH3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NUP43Q8NFH3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUP43Q8NFH3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUP43Q8NFH3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.71■□□□□ 0.43
NUP43Q8NFH3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUP43Q8NFH3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NUP43Q8NFH3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUP43Q8NFH3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUP43Q8NFH3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
NUP43Q8NFH3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUP43Q8NFH3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
NUP43Q8NFH3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUP43Q8NFH3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.71■□□□□ 0.43
NUP43Q8NFH3 AC011506.1-201ENST00000474329 610 ntBASIC17.71■□□□□ 0.43
NUP43Q8NFH3 CD177P1-201ENST00000606252 935 ntBASIC17.71■□□□□ 0.43
NUP43Q8NFH3 MIR6786-201ENST00000616843 113 ntBASIC17.71■□□□□ 0.43
NUP43Q8NFH3 AC130371.2-201ENST00000619443 611 ntBASIC17.71■□□□□ 0.43
NUP43Q8NFH3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NUP43Q8NFH3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
NUP43Q8NFH3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUP43Q8NFH3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUP43Q8NFH3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.71■□□□□ 0.43
NUP43Q8NFH3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NUP43Q8NFH3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
NUP43Q8NFH3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.71■□□□□ 0.43
NUP43Q8NFH3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NUP43Q8NFH3 AL031598.1-201ENST00000561511 1773 ntBASIC17.71■□□□□ 0.43
NUP43Q8NFH3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
NUP43Q8NFH3 Z98044.1-201ENST00000632503 1764 ntBASIC17.71■□□□□ 0.43
NUP43Q8NFH3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.71■□□□□ 0.42
NUP43Q8NFH3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP43Q8NFH3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP43Q8NFH3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP43Q8NFH3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP43Q8NFH3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP43Q8NFH3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.7■□□□□ 0.42
NUP43Q8NFH3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP43Q8NFH3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.7■□□□□ 0.42
NUP43Q8NFH3 AL512353.2-201ENST00000448759 1962 ntBASIC17.7■□□□□ 0.42
NUP43Q8NFH3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP43Q8NFH3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP43Q8NFH3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NUP43Q8NFH3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
NUP43Q8NFH3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP43Q8NFH3 FAM207BP-201ENST00000447172 505 ntBASIC17.7■□□□□ 0.42
NUP43Q8NFH3 AC008040.2-201ENST00000461049 708 ntBASIC17.7■□□□□ 0.42
NUP43Q8NFH3 B3GAT3P1-201ENST00000471720 806 ntBASIC17.7■□□□□ 0.42
NUP43Q8NFH3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NUP43Q8NFH3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NUP43Q8NFH3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP43Q8NFH3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP43Q8NFH3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.7■□□□□ 0.42
NUP43Q8NFH3 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NUP43Q8NFH3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.7■□□□□ 0.42
NUP43Q8NFH3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.7■□□□□ 0.42
NUP43Q8NFH3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP43Q8NFH3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP43Q8NFH3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.7■□□□□ 0.42
NUP43Q8NFH3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NUP43Q8NFH3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NUP43Q8NFH3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.69■□□□□ 0.42
NUP43Q8NFH3 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.69■□□□□ 0.42
NUP43Q8NFH3 FSCN1P1-201ENST00000568912 1481 ntBASIC17.69■□□□□ 0.42
NUP43Q8NFH3 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NUP43Q8NFH3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NUP43Q8NFH3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NUP43Q8NFH3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NUP43Q8NFH3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NUP43Q8NFH3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
NUP43Q8NFH3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NUP43Q8NFH3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NUP43Q8NFH3 RPS2P55-201ENST00000397318 883 ntBASIC17.69■□□□□ 0.42
NUP43Q8NFH3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.69■□□□□ 0.42
NUP43Q8NFH3 AC107956.1-201ENST00000494359 873 ntBASIC17.69■□□□□ 0.42
NUP43Q8NFH3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms