Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC168Q8NDH2 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CCDC168Q8NDH2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC168Q8NDH2 AL592071.1-201ENST00000611956 408 ntBASIC15.8■□□□□ 0.12
CCDC168Q8NDH2 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CCDC168Q8NDH2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC168Q8NDH2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCDC168Q8NDH2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC168Q8NDH2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC168Q8NDH2 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC168Q8NDH2 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC168Q8NDH2 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC168Q8NDH2 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC168Q8NDH2 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC168Q8NDH2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CCDC168Q8NDH2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC168Q8NDH2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC168Q8NDH2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC168Q8NDH2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC168Q8NDH2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
CCDC168Q8NDH2 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC168Q8NDH2 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC168Q8NDH2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
CCDC168Q8NDH2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC168Q8NDH2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 DNAJB3-202ENST00000449667 1266 ntBASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 MIR3197-201ENST00000582241 73 ntBASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 AC104109.2-201ENST00000602919 1418 ntBASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 AC006128.1-201ENST00000624704 1661 ntBASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC168Q8NDH2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 DNAJB3-201ENST00000446806 729 ntBASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 ZNF259P1-201ENST00000407656 1365 ntBASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 AL391422.3-201ENST00000603791 2761 ntBASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 AL023284.2-201ENST00000405850 579 ntBASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC15.78■□□□□ 0.12
CCDC168Q8NDH2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC168Q8NDH2 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC168Q8NDH2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.77■□□□□ 0.12
CCDC168Q8NDH2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC168Q8NDH2 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CCDC168Q8NDH2 FAM8A3P-201ENST00000427218 844 ntBASIC15.77■□□□□ 0.12
CCDC168Q8NDH2 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.77■□□□□ 0.12
CCDC168Q8NDH2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CCDC168Q8NDH2 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.77■□□□□ 0.12
CCDC168Q8NDH2 AL591684.3-201ENST00000605187 298 ntBASIC15.77■□□□□ 0.12
CCDC168Q8NDH2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms