Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX5Q8N196 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIX5Q8N196 GPAT2P1-201ENST00000444924 1672 ntBASIC19.36■□□□□ 0.69
SIX5Q8N196 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SIX5Q8N196 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SIX5Q8N196 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX5Q8N196 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SIX5Q8N196 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX5Q8N196 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.35■□□□□ 0.69
SIX5Q8N196 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SIX5Q8N196 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SIX5Q8N196 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX5Q8N196 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX5Q8N196 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SIX5Q8N196 TOB2P1-201ENST00000469761 992 ntBASIC19.35■□□□□ 0.69
SIX5Q8N196 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.35■□□□□ 0.69
SIX5Q8N196 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.35■□□□□ 0.69
SIX5Q8N196 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.35■□□□□ 0.69
SIX5Q8N196 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.35■□□□□ 0.69
SIX5Q8N196 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX5Q8N196 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.35■□□□□ 0.69
SIX5Q8N196 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.35■□□□□ 0.69
SIX5Q8N196 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SIX5Q8N196 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIX5Q8N196 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SIX5Q8N196 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.34■□□□□ 0.69
SIX5Q8N196 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SIX5Q8N196 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.34■□□□□ 0.69
SIX5Q8N196 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
SIX5Q8N196 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SIX5Q8N196 HLA-F-220ENST00000434407 884 ntBASIC19.34■□□□□ 0.69
SIX5Q8N196 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.34■□□□□ 0.69
SIX5Q8N196 AC120114.3-201ENST00000611923 658 ntBASIC19.34■□□□□ 0.69
SIX5Q8N196 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.34■□□□□ 0.69
SIX5Q8N196 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SIX5Q8N196 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SIX5Q8N196 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.34■□□□□ 0.69
SIX5Q8N196 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.34■□□□□ 0.69
SIX5Q8N196 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SIX5Q8N196 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SIX5Q8N196 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.34■□□□□ 0.69
SIX5Q8N196 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SIX5Q8N196 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.33■□□□□ 0.69
SIX5Q8N196 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SIX5Q8N196 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.33■□□□□ 0.69
SIX5Q8N196 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SIX5Q8N196 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SIX5Q8N196 AC138932.1-201ENST00000534164 6830 ntBASIC19.33■□□□□ 0.69
SIX5Q8N196 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
SIX5Q8N196 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SIX5Q8N196 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SIX5Q8N196 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SIX5Q8N196 MRPL3P1-201ENST00000400109 1033 ntBASIC19.33■□□□□ 0.68
SIX5Q8N196 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.33■□□□□ 0.68
SIX5Q8N196 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
SIX5Q8N196 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.33■□□□□ 0.68
SIX5Q8N196 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.33■□□□□ 0.68
SIX5Q8N196 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.33■□□□□ 0.68
SIX5Q8N196 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SIX5Q8N196 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.33■□□□□ 0.68
SIX5Q8N196 AL136038.4-201ENST00000603606 1261 ntBASIC19.33■□□□□ 0.68
SIX5Q8N196 AC139530.3-201ENST00000620344 690 ntBASIC19.33■□□□□ 0.68
SIX5Q8N196 AL157888.1-201ENST00000631930 593 ntBASIC19.33■□□□□ 0.68
SIX5Q8N196 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
SIX5Q8N196 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.33■□□□□ 0.68
SIX5Q8N196 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SIX5Q8N196 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SIX5Q8N196 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SIX5Q8N196 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SIX5Q8N196 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
SIX5Q8N196 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SIX5Q8N196 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SIX5Q8N196 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SIX5Q8N196 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SIX5Q8N196 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.32■□□□□ 0.68
SIX5Q8N196 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIX5Q8N196 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SIX5Q8N196 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SIX5Q8N196 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SIX5Q8N196 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIX5Q8N196 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
SIX5Q8N196 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
SIX5Q8N196 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.32■□□□□ 0.68
SIX5Q8N196 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.32■□□□□ 0.68
SIX5Q8N196 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.32■□□□□ 0.68
SIX5Q8N196 AL121912.1-201ENST00000603683 238 ntBASIC19.32■□□□□ 0.68
SIX5Q8N196 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.32■□□□□ 0.68
SIX5Q8N196 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIX5Q8N196 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SIX5Q8N196 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.32■□□□□ 0.68
SIX5Q8N196 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.32■□□□□ 0.68
SIX5Q8N196 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
SIX5Q8N196 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SIX5Q8N196 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.32■□□□□ 0.68
SIX5Q8N196 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SIX5Q8N196 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIX5Q8N196 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.32■□□□□ 0.68
SIX5Q8N196 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIX5Q8N196 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SIX5Q8N196 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms