Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.72■□□□□ 0.75
RFWD3Q6PCD5 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFWD3Q6PCD5 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFWD3Q6PCD5 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RFWD3Q6PCD5 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFWD3Q6PCD5 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFWD3Q6PCD5 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
RFWD3Q6PCD5 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.72■□□□□ 0.75
RFWD3Q6PCD5 AC005363.2-201ENST00000618631 242 ntBASIC19.72■□□□□ 0.75
RFWD3Q6PCD5 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.72■□□□□ 0.75
RFWD3Q6PCD5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFWD3Q6PCD5 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RFWD3Q6PCD5 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RFWD3Q6PCD5 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RFWD3Q6PCD5 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 FAM210CP-201ENST00000445714 574 ntBASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 PRSS44-201ENST00000515154 1146 ntBASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 AIRN-201ENST00000601203 4374 ntBASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RFWD3Q6PCD5 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 AC005521.1-201ENST00000393351 872 ntBASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 SLC25A3P1-201ENST00000443844 931 ntBASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RFWD3Q6PCD5 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
RFWD3Q6PCD5 AC005082.1-201ENST00000413042 2259 ntBASIC19.69■□□□□ 0.74
RFWD3Q6PCD5 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFWD3Q6PCD5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
RFWD3Q6PCD5 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.69■□□□□ 0.74
RFWD3Q6PCD5 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFWD3Q6PCD5 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFWD3Q6PCD5 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFWD3Q6PCD5 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.69■□□□□ 0.74
RFWD3Q6PCD5 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFWD3Q6PCD5 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
RFWD3Q6PCD5 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFWD3Q6PCD5 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
RFWD3Q6PCD5 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RFWD3Q6PCD5 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
RFWD3Q6PCD5 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.69■□□□□ 0.74
RFWD3Q6PCD5 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.69■□□□□ 0.74
RFWD3Q6PCD5 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms