Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTCRAQ6ISU1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
PTCRAQ6ISU1 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC19.5■□□□□ 0.71
PTCRAQ6ISU1 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTCRAQ6ISU1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.5■□□□□ 0.71
PTCRAQ6ISU1 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.5■□□□□ 0.71
PTCRAQ6ISU1 AC010240.3-201ENST00000607688 395 ntBASIC19.5■□□□□ 0.71
PTCRAQ6ISU1 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.5■□□□□ 0.71
PTCRAQ6ISU1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PTCRAQ6ISU1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTCRAQ6ISU1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTCRAQ6ISU1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.5■□□□□ 0.71
PTCRAQ6ISU1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PTCRAQ6ISU1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTCRAQ6ISU1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTCRAQ6ISU1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.49■□□□□ 0.71
PTCRAQ6ISU1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PTCRAQ6ISU1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
PTCRAQ6ISU1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCRAQ6ISU1 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PTCRAQ6ISU1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.49■□□□□ 0.71
PTCRAQ6ISU1 RN7SL606P-201ENST00000472779 293 ntBASIC19.49■□□□□ 0.71
PTCRAQ6ISU1 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.49■□□□□ 0.71
PTCRAQ6ISU1 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.49■□□□□ 0.71
PTCRAQ6ISU1 AL049840.3-201ENST00000602669 611 ntBASIC19.49■□□□□ 0.71
PTCRAQ6ISU1 AL591684.3-201ENST00000605187 298 ntBASIC19.49■□□□□ 0.71
PTCRAQ6ISU1 MIR7706-201ENST00000613747 67 ntBASIC19.49■□□□□ 0.71
PTCRAQ6ISU1 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTCRAQ6ISU1 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PTCRAQ6ISU1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCRAQ6ISU1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCRAQ6ISU1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.49■□□□□ 0.71
PTCRAQ6ISU1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.49■□□□□ 0.71
PTCRAQ6ISU1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTCRAQ6ISU1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCRAQ6ISU1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTCRAQ6ISU1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 AC104417.2-201ENST00000562989 1793 ntBASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 POM121L3P-201ENST00000419331 1163 ntBASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 KRT18P23-201ENST00000435622 1283 ntBASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 AC098831.1-202ENST00000438821 336 ntBASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 AC091607.1-201ENST00000490318 1060 ntBASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
PTCRAQ6ISU1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
PTCRAQ6ISU1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCRAQ6ISU1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCRAQ6ISU1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.47■□□□□ 0.71
PTCRAQ6ISU1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PTCRAQ6ISU1 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCRAQ6ISU1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCRAQ6ISU1 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTCRAQ6ISU1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.47■□□□□ 0.71
PTCRAQ6ISU1 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.47■□□□□ 0.71
PTCRAQ6ISU1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.47■□□□□ 0.71
PTCRAQ6ISU1 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.47■□□□□ 0.71
PTCRAQ6ISU1 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.47■□□□□ 0.71
PTCRAQ6ISU1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PTCRAQ6ISU1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCRAQ6ISU1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCRAQ6ISU1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTCRAQ6ISU1 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTCRAQ6ISU1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.47■□□□□ 0.71
PTCRAQ6ISU1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTCRAQ6ISU1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PTCRAQ6ISU1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTCRAQ6ISU1 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms