Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC092364.2-202ENST00000597012 1073 ntBASIC16.43■□□□□ 0.22
LRRK2Q5S007 AL596442.2-201ENST00000610240 980 ntBASIC16.43■□□□□ 0.22
LRRK2Q5S007 AC114341.1-201ENST00000618070 349 ntBASIC16.43■□□□□ 0.22
LRRK2Q5S007 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LRRK2Q5S007 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRK2Q5S007 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRK2Q5S007 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRK2Q5S007 AC244015.2-201ENST00000616358 1861 ntBASIC16.42■□□□□ 0.22
LRRK2Q5S007 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRK2Q5S007 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRK2Q5S007 AC012645.4-201ENST00000610691 1061 ntBASIC16.42■□□□□ 0.22
LRRK2Q5S007 AC116407.3-201ENST00000623905 1129 ntBASIC16.42■□□□□ 0.22
LRRK2Q5S007 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LRRK2Q5S007 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRK2Q5S007 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.42■□□□□ 0.22
LRRK2Q5S007 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRK2Q5S007 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRK2Q5S007 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRK2Q5S007 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRK2Q5S007 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRK2Q5S007 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRK2Q5S007 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.42■□□□□ 0.22
LRRK2Q5S007 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRK2Q5S007 NUS1P2-201ENST00000417358 873 ntBASIC16.42■□□□□ 0.22
LRRK2Q5S007 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.42■□□□□ 0.22
LRRK2Q5S007 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRK2Q5S007 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRK2Q5S007 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRK2Q5S007 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRK2Q5S007 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LRRK2Q5S007 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRK2Q5S007 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRK2Q5S007 CNN2P11-201ENST00000429351 262 ntBASIC16.41■□□□□ 0.22
LRRK2Q5S007 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRK2Q5S007 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.41■□□□□ 0.22
LRRK2Q5S007 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.41■□□□□ 0.22
LRRK2Q5S007 SPCS2P1-201ENST00000561636 679 ntBASIC16.41■□□□□ 0.22
LRRK2Q5S007 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRK2Q5S007 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRK2Q5S007 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
LRRK2Q5S007 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRK2Q5S007 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRK2Q5S007 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRK2Q5S007 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRK2Q5S007 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRK2Q5S007 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRK2Q5S007 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRK2Q5S007 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRK2Q5S007 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.41■□□□□ 0.22
LRRK2Q5S007 AC002347.1-201ENST00000569543 541 ntBASIC16.41■□□□□ 0.22
LRRK2Q5S007 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRK2Q5S007 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRK2Q5S007 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRK2Q5S007 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRK2Q5S007 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRK2Q5S007 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRK2Q5S007 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
LRRK2Q5S007 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRK2Q5S007 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
LRRK2Q5S007 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRK2Q5S007 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRK2Q5S007 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
LRRK2Q5S007 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
LRRK2Q5S007 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.4■□□□□ 0.22
LRRK2Q5S007 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRK2Q5S007 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRK2Q5S007 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRK2Q5S007 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRK2Q5S007 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRK2Q5S007 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRK2Q5S007 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRK2Q5S007 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRK2Q5S007 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRK2Q5S007 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
LRRK2Q5S007 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
LRRK2Q5S007 AC096582.2-201ENST00000510860 516 ntBASIC16.4■□□□□ 0.22
LRRK2Q5S007 AC005336.2-201ENST00000593183 939 ntBASIC16.4■□□□□ 0.22
LRRK2Q5S007 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
LRRK2Q5S007 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
LRRK2Q5S007 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
LRRK2Q5S007 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.39■□□□□ 0.21
LRRK2Q5S007 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRRK2Q5S007 FBXW4P1-201ENST00000426721 2239 ntBASIC16.39■□□□□ 0.21
LRRK2Q5S007 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRK2Q5S007 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.39■□□□□ 0.21
LRRK2Q5S007 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRK2Q5S007 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
LRRK2Q5S007 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.39■□□□□ 0.21
LRRK2Q5S007 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.39■□□□□ 0.21
LRRK2Q5S007 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
LRRK2Q5S007 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.39■□□□□ 0.21
LRRK2Q5S007 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRK2Q5S007 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRK2Q5S007 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRK2Q5S007 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.39■□□□□ 0.21
LRRK2Q5S007 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
LRRK2Q5S007 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.39■□□□□ 0.21
LRRK2Q5S007 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.39■□□□□ 0.21
LRRK2Q5S007 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.39■□□□□ 0.21
LRRK2Q5S007 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms