Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM71Q2Q1W2 CHCHD2P8-201ENST00000429873 447 ntBASIC20.64■□□□□ 0.89
TRIM71Q2Q1W2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM71Q2Q1W2 FDX1P1-201ENST00000449115 551 ntBASIC20.64■□□□□ 0.89
TRIM71Q2Q1W2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.64■□□□□ 0.89
TRIM71Q2Q1W2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM71Q2Q1W2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM71Q2Q1W2 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.64■□□□□ 0.89
TRIM71Q2Q1W2 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.64■□□□□ 0.89
TRIM71Q2Q1W2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM71Q2Q1W2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM71Q2Q1W2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM71Q2Q1W2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM71Q2Q1W2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.64■□□□□ 0.89
TRIM71Q2Q1W2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM71Q2Q1W2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM71Q2Q1W2 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRIM71Q2Q1W2 AL109659.2-201ENST00000606809 1674 ntBASIC20.64■□□□□ 0.89
TRIM71Q2Q1W2 TEX21P-204ENST00000641479 1693 ntBASIC20.64■□□□□ 0.89
TRIM71Q2Q1W2 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM71Q2Q1W2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM71Q2Q1W2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM71Q2Q1W2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM71Q2Q1W2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TRIM71Q2Q1W2 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.63■□□□□ 0.89
TRIM71Q2Q1W2 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TRIM71Q2Q1W2 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.63■□□□□ 0.89
TRIM71Q2Q1W2 AL845331.1-201ENST00000424978 1190 ntBASIC20.63■□□□□ 0.89
TRIM71Q2Q1W2 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.63■□□□□ 0.89
TRIM71Q2Q1W2 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TRIM71Q2Q1W2 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM71Q2Q1W2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
TRIM71Q2Q1W2 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM71Q2Q1W2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
TRIM71Q2Q1W2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TRIM71Q2Q1W2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM71Q2Q1W2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM71Q2Q1W2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TRIM71Q2Q1W2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TRIM71Q2Q1W2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.63■□□□□ 0.89
TRIM71Q2Q1W2 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM71Q2Q1W2 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM71Q2Q1W2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM71Q2Q1W2 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM71Q2Q1W2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM71Q2Q1W2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TRIM71Q2Q1W2 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM71Q2Q1W2 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM71Q2Q1W2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM71Q2Q1W2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM71Q2Q1W2 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM71Q2Q1W2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM71Q2Q1W2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM71Q2Q1W2 TSPY22P-201ENST00000427496 604 ntBASIC20.62■□□□□ 0.89
TRIM71Q2Q1W2 NUS1P1-201ENST00000446295 882 ntBASIC20.62■□□□□ 0.89
TRIM71Q2Q1W2 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.62■□□□□ 0.89
TRIM71Q2Q1W2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.62■□□□□ 0.89
TRIM71Q2Q1W2 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.62■□□□□ 0.89
TRIM71Q2Q1W2 AC111152.3-201ENST00000569699 673 ntBASIC20.62■□□□□ 0.89
TRIM71Q2Q1W2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM71Q2Q1W2 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM71Q2Q1W2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.62■□□□□ 0.89
TRIM71Q2Q1W2 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM71Q2Q1W2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
TRIM71Q2Q1W2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TRIM71Q2Q1W2 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIM71Q2Q1W2 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.61■□□□□ 0.89
TRIM71Q2Q1W2 AL512353.2-201ENST00000448759 1962 ntBASIC20.61■□□□□ 0.89
TRIM71Q2Q1W2 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM71Q2Q1W2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM71Q2Q1W2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIM71Q2Q1W2 AL157384.1-201ENST00000445995 2473 ntBASIC20.61■□□□□ 0.89
TRIM71Q2Q1W2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TRIM71Q2Q1W2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM71Q2Q1W2 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.61■□□□□ 0.89
TRIM71Q2Q1W2 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.61■□□□□ 0.89
TRIM71Q2Q1W2 TPSP2-201ENST00000561760 610 ntBASIC20.61■□□□□ 0.89
TRIM71Q2Q1W2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
TRIM71Q2Q1W2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TRIM71Q2Q1W2 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM71Q2Q1W2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.61■□□□□ 0.89
TRIM71Q2Q1W2 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM71Q2Q1W2 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TRIM71Q2Q1W2 RCC2P3-201ENST00000418112 1537 ntBASIC20.61■□□□□ 0.89
TRIM71Q2Q1W2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM71Q2Q1W2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
TRIM71Q2Q1W2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM71Q2Q1W2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM71Q2Q1W2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM71Q2Q1W2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.6■□□□□ 0.89
TRIM71Q2Q1W2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.6■□□□□ 0.89
TRIM71Q2Q1W2 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.6■□□□□ 0.89
TRIM71Q2Q1W2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.6■□□□□ 0.89
TRIM71Q2Q1W2 AC008556.1-201ENST00000610908 2040 ntBASIC20.6■□□□□ 0.89
TRIM71Q2Q1W2 TREX1-205ENST00000625293 1783 ntBASIC20.6■□□□□ 0.89
TRIM71Q2Q1W2 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.6■□□□□ 0.89
TRIM71Q2Q1W2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM71Q2Q1W2 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM71Q2Q1W2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.6■□□□□ 0.89
TRIM71Q2Q1W2 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms