Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC16.27■□□□□ 0.2
AP3S2P59780 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.27■□□□□ 0.2
AP3S2P59780 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP3S2P59780 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.27■□□□□ 0.2
AP3S2P59780 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.27■□□□□ 0.2
AP3S2P59780 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP3S2P59780 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
AP3S2P59780 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
AP3S2P59780 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
AP3S2P59780 LINC00896-202ENST00000609602 2128 ntBASIC16.27■□□□□ 0.19
AP3S2P59780 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.27■□□□□ 0.19
AP3S2P59780 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
AP3S2P59780 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
AP3S2P59780 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.27■□□□□ 0.19
AP3S2P59780 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S2P59780 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.26■□□□□ 0.19
AP3S2P59780 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S2P59780 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
AP3S2P59780 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S2P59780 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S2P59780 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S2P59780 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.26■□□□□ 0.19
AP3S2P59780 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S2P59780 MCRIP2P1-201ENST00000394346 511 ntBASIC16.26■□□□□ 0.19
AP3S2P59780 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.26■□□□□ 0.19
AP3S2P59780 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.26■□□□□ 0.19
AP3S2P59780 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S2P59780 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S2P59780 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
AP3S2P59780 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
AP3S2P59780 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S2P59780 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S2P59780 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S2P59780 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S2P59780 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S2P59780 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
AP3S2P59780 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S2P59780 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S2P59780 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S2P59780 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S2P59780 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S2P59780 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S2P59780 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S2P59780 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
AP3S2P59780 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S2P59780 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S2P59780 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S2P59780 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S2P59780 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
AP3S2P59780 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.25■□□□□ 0.19
AP3S2P59780 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S2P59780 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S2P59780 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S2P59780 SLC25A6P5-201ENST00000435663 894 ntBASIC16.25■□□□□ 0.19
AP3S2P59780 YBX1P1-201ENST00000445822 960 ntBASIC16.25■□□□□ 0.19
AP3S2P59780 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S2P59780 AL162412.1-201ENST00000567129 965 ntBASIC16.25■□□□□ 0.19
AP3S2P59780 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC16.25■□□□□ 0.19
AP3S2P59780 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S2P59780 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.25■□□□□ 0.19
AP3S2P59780 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.25■□□□□ 0.19
AP3S2P59780 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC16.25■□□□□ 0.19
AP3S2P59780 AC105020.6-201ENST00000621523 1217 ntBASIC16.25■□□□□ 0.19
AP3S2P59780 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
AP3S2P59780 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S2P59780 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
AP3S2P59780 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S2P59780 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S2P59780 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S2P59780 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
AP3S2P59780 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.25■□□□□ 0.19
AP3S2P59780 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
AP3S2P59780 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S2P59780 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
AP3S2P59780 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
AP3S2P59780 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
AP3S2P59780 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S2P59780 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
AP3S2P59780 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
AP3S2P59780 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.25■□□□□ 0.19
AP3S2P59780 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.25■□□□□ 0.19
AP3S2P59780 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S2P59780 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.24■□□□□ 0.19
AP3S2P59780 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.24■□□□□ 0.19
AP3S2P59780 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.24■□□□□ 0.19
AP3S2P59780 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.24■□□□□ 0.19
AP3S2P59780 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S2P59780 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S2P59780 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.24■□□□□ 0.19
AP3S2P59780 AC126763.1-201ENST00000552015 2118 ntBASIC16.24■□□□□ 0.19
AP3S2P59780 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S2P59780 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
AP3S2P59780 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S2P59780 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S2P59780 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S2P59780 AC100791.3-201ENST00000617619 330 ntBASIC16.24■□□□□ 0.19
AP3S2P59780 MIR6084-201ENST00000622012 110 ntBASIC16.24■□□□□ 0.19
AP3S2P59780 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S2P59780 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
AP3S2P59780 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms