Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPPLY3P57055 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
RIPPLY3P57055 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPPLY3P57055 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPPLY3P57055 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPPLY3P57055 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPPLY3P57055 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPPLY3P57055 AP006587.1-201ENST00000534129 1502 ntBASIC15.65■□□□□ 0.1
RIPPLY3P57055 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RIPPLY3P57055 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RIPPLY3P57055 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RIPPLY3P57055 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPPLY3P57055 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.65■□□□□ 0.1
RIPPLY3P57055 TSPY22P-201ENST00000427496 604 ntBASIC15.65■□□□□ 0.1
RIPPLY3P57055 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.65■□□□□ 0.1
RIPPLY3P57055 AC022494.1-201ENST00000466044 728 ntBASIC15.65■□□□□ 0.1
RIPPLY3P57055 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.65■□□□□ 0.1
RIPPLY3P57055 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.65■□□□□ 0.1
RIPPLY3P57055 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.65■□□□□ 0.1
RIPPLY3P57055 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.65■□□□□ 0.1
RIPPLY3P57055 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.65■□□□□ 0.1
RIPPLY3P57055 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.65■□□□□ 0.1
RIPPLY3P57055 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.65■□□□□ 0.1
RIPPLY3P57055 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RIPPLY3P57055 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RIPPLY3P57055 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC15.65■□□□□ 0.1
RIPPLY3P57055 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RIPPLY3P57055 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
RIPPLY3P57055 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
RIPPLY3P57055 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RIPPLY3P57055 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPPLY3P57055 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPPLY3P57055 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPPLY3P57055 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPPLY3P57055 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC15.64■□□□□ 0.1
RIPPLY3P57055 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RIPPLY3P57055 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC15.64■□□□□ 0.09
RIPPLY3P57055 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RIPPLY3P57055 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RIPPLY3P57055 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RIPPLY3P57055 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
RIPPLY3P57055 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RIPPLY3P57055 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RIPPLY3P57055 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RIPPLY3P57055 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RIPPLY3P57055 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.64■□□□□ 0.09
RIPPLY3P57055 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RIPPLY3P57055 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RIPPLY3P57055 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RIPPLY3P57055 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RIPPLY3P57055 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RIPPLY3P57055 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.64■□□□□ 0.09
RIPPLY3P57055 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RIPPLY3P57055 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RIPPLY3P57055 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.64■□□□□ 0.09
RIPPLY3P57055 DUX4L17-201ENST00000557360 1267 ntBASIC15.64■□□□□ 0.09
RIPPLY3P57055 AC040169.1-201ENST00000565382 521 ntBASIC15.64■□□□□ 0.09
RIPPLY3P57055 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.64■□□□□ 0.09
RIPPLY3P57055 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RIPPLY3P57055 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.64■□□□□ 0.09
RIPPLY3P57055 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC15.64■□□□□ 0.09
RIPPLY3P57055 AC099336.1-202ENST00000602961 463 ntBASIC15.64■□□□□ 0.09
RIPPLY3P57055 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.64■□□□□ 0.09
RIPPLY3P57055 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RIPPLY3P57055 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RIPPLY3P57055 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.64■□□□□ 0.09
RIPPLY3P57055 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RIPPLY3P57055 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RIPPLY3P57055 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RIPPLY3P57055 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RIPPLY3P57055 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RIPPLY3P57055 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC15.63■□□□□ 0.09
RIPPLY3P57055 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RIPPLY3P57055 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC15.63■□□□□ 0.09
RIPPLY3P57055 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RIPPLY3P57055 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RIPPLY3P57055 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RIPPLY3P57055 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RIPPLY3P57055 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RIPPLY3P57055 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RIPPLY3P57055 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RIPPLY3P57055 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RIPPLY3P57055 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RIPPLY3P57055 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RIPPLY3P57055 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RIPPLY3P57055 AC211486.1-202ENST00000416371 468 ntBASIC15.63■□□□□ 0.09
RIPPLY3P57055 AC211476.1-201ENST00000503899 468 ntBASIC15.63■□□□□ 0.09
RIPPLY3P57055 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.63■□□□□ 0.09
RIPPLY3P57055 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.63■□□□□ 0.09
RIPPLY3P57055 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.63■□□□□ 0.09
RIPPLY3P57055 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RIPPLY3P57055 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.63■□□□□ 0.09
RIPPLY3P57055 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.63■□□□□ 0.09
RIPPLY3P57055 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.63■□□□□ 0.09
RIPPLY3P57055 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.63■□□□□ 0.09
RIPPLY3P57055 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.63■□□□□ 0.09
RIPPLY3P57055 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RIPPLY3P57055 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RIPPLY3P57055 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RIPPLY3P57055 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms