Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
HOXA11P31270 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HOXA11P31270 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.48■□□□□ 0.87
HOXA11P31270 RASA4DP-201ENST00000460726 1199 ntBASIC20.48■□□□□ 0.87
HOXA11P31270 SEC1P-202ENST00000473944 940 ntBASIC20.48■□□□□ 0.87
HOXA11P31270 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.48■□□□□ 0.87
HOXA11P31270 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.48■□□□□ 0.87
HOXA11P31270 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
HOXA11P31270 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
HOXA11P31270 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
HOXA11P31270 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
HOXA11P31270 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.48■□□□□ 0.87
HOXA11P31270 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.48■□□□□ 0.87
HOXA11P31270 AC005332.1-201ENST00000577698 1310 ntBASIC20.48■□□□□ 0.87
HOXA11P31270 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.48■□□□□ 0.87
HOXA11P31270 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HOXA11P31270 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HOXA11P31270 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HOXA11P31270 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HOXA11P31270 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
HOXA11P31270 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HOXA11P31270 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.47■□□□□ 0.87
HOXA11P31270 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HOXA11P31270 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.47■□□□□ 0.87
HOXA11P31270 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HOXA11P31270 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HOXA11P31270 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.47■□□□□ 0.87
HOXA11P31270 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HOXA11P31270 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HOXA11P31270 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HOXA11P31270 UPK3BP1-201ENST00000428678 509 ntBASIC20.47■□□□□ 0.87
HOXA11P31270 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.47■□□□□ 0.87
HOXA11P31270 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.47■□□□□ 0.87
HOXA11P31270 SPDYE13P-201ENST00000445314 798 ntBASIC20.47■□□□□ 0.87
HOXA11P31270 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.47■□□□□ 0.87
HOXA11P31270 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.47■□□□□ 0.87
HOXA11P31270 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.47■□□□□ 0.87
HOXA11P31270 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HOXA11P31270 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.47■□□□□ 0.87
HOXA11P31270 AL136038.3-201ENST00000561909 1096 ntBASIC20.47■□□□□ 0.87
HOXA11P31270 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.47■□□□□ 0.87
HOXA11P31270 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.47■□□□□ 0.87
HOXA11P31270 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.47■□□□□ 0.87
HOXA11P31270 AC116407.4-201ENST00000623319 1061 ntBASIC20.47■□□□□ 0.87
HOXA11P31270 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.47■□□□□ 0.87
HOXA11P31270 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HOXA11P31270 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.47■□□□□ 0.87
HOXA11P31270 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.47■□□□□ 0.87
HOXA11P31270 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HOXA11P31270 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HOXA11P31270 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HOXA11P31270 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HOXA11P31270 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HOXA11P31270 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HOXA11P31270 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
HOXA11P31270 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.46■□□□□ 0.87
HOXA11P31270 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HOXA11P31270 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HOXA11P31270 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HOXA11P31270 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
HOXA11P31270 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.46■□□□□ 0.87
HOXA11P31270 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.46■□□□□ 0.87
HOXA11P31270 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
HOXA11P31270 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HOXA11P31270 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HOXA11P31270 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HOXA11P31270 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HOXA11P31270 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HOXA11P31270 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
HOXA11P31270 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HOXA11P31270 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.46■□□□□ 0.87
HOXA11P31270 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
HOXA11P31270 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HOXA11P31270 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
HOXA11P31270 LINC01311-201ENST00000565162 1445 ntBASIC20.45■□□□□ 0.86
HOXA11P31270 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HOXA11P31270 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HOXA11P31270 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HOXA11P31270 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HOXA11P31270 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HOXA11P31270 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
HOXA11P31270 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HOXA11P31270 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HOXA11P31270 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HOXA11P31270 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.45■□□□□ 0.86
HOXA11P31270 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HOXA11P31270 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HOXA11P31270 AC092597.1-201ENST00000487352 616 ntBASIC20.45■□□□□ 0.86
HOXA11P31270 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.45■□□□□ 0.86
HOXA11P31270 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.45■□□□□ 0.86
HOXA11P31270 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.45■□□□□ 0.86
HOXA11P31270 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
HOXA11P31270 ZNF444P1-201ENST00000559497 298 ntBASIC20.45■□□□□ 0.86
HOXA11P31270 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.45■□□□□ 0.86
HOXA11P31270 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.45■□□□□ 0.86
HOXA11P31270 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HOXA11P31270 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
HOXA11P31270 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.45■□□□□ 0.86
HOXA11P31270 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
HOXA11P31270 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms