Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GDF1P27539 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GDF1P27539 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.17■□□□□ 0.34
GDF1P27539 KRT8P45-201ENST00000414328 1447 ntBASIC17.17■□□□□ 0.34
GDF1P27539 AK4P3-201ENST00000418260 669 ntBASIC17.17■□□□□ 0.34
GDF1P27539 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.17■□□□□ 0.34
GDF1P27539 AC104076.2-201ENST00000448912 469 ntBASIC17.17■□□□□ 0.34
GDF1P27539 DUX4L26-201ENST00000489078 1255 ntBASIC17.17■□□□□ 0.34
GDF1P27539 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GDF1P27539 AL138966.2-201ENST00000621997 464 ntBASIC17.17■□□□□ 0.34
GDF1P27539 AL590326.2-201ENST00000625139 305 ntBASIC17.17■□□□□ 0.34
GDF1P27539 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GDF1P27539 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
GDF1P27539 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.17■□□□□ 0.34
GDF1P27539 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.17■□□□□ 0.34
GDF1P27539 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
GDF1P27539 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.17■□□□□ 0.34
GDF1P27539 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
GDF1P27539 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
GDF1P27539 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
GDF1P27539 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
GDF1P27539 AC007952.6-201ENST00000573168 2673 ntBASIC17.16■□□□□ 0.34
GDF1P27539 AC003957.1-201ENST00000625108 2673 ntBASIC17.16■□□□□ 0.34
GDF1P27539 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
GDF1P27539 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GDF1P27539 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
GDF1P27539 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.16■□□□□ 0.34
GDF1P27539 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.16■□□□□ 0.34
GDF1P27539 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
GDF1P27539 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.16■□□□□ 0.34
GDF1P27539 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GDF1P27539 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GDF1P27539 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GDF1P27539 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
GDF1P27539 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GDF1P27539 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
GDF1P27539 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
GDF1P27539 COX11P1-201ENST00000489116 835 ntBASIC17.16■□□□□ 0.34
GDF1P27539 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
GDF1P27539 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
GDF1P27539 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
GDF1P27539 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.16■□□□□ 0.34
GDF1P27539 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
GDF1P27539 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.16■□□□□ 0.34
GDF1P27539 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GDF1P27539 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
GDF1P27539 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
GDF1P27539 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GDF1P27539 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.16■□□□□ 0.34
GDF1P27539 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GDF1P27539 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.16■□□□□ 0.34
GDF1P27539 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
GDF1P27539 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
GDF1P27539 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
GDF1P27539 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GDF1P27539 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
GDF1P27539 AC093484.2-201ENST00000580996 2166 ntBASIC17.15■□□□□ 0.34
GDF1P27539 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
GDF1P27539 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GDF1P27539 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GDF1P27539 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GDF1P27539 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GDF1P27539 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.15■□□□□ 0.34
GDF1P27539 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GDF1P27539 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GDF1P27539 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GDF1P27539 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.15■□□□□ 0.34
GDF1P27539 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GDF1P27539 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.15■□□□□ 0.34
GDF1P27539 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.15■□□□□ 0.34
GDF1P27539 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
GDF1P27539 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.15■□□□□ 0.34
GDF1P27539 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.15■□□□□ 0.34
GDF1P27539 AC139887.4-201ENST00000607877 719 ntBASIC17.15■□□□□ 0.34
GDF1P27539 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.15■□□□□ 0.34
GDF1P27539 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
GDF1P27539 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GDF1P27539 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GDF1P27539 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
GDF1P27539 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.15■□□□□ 0.34
GDF1P27539 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
GDF1P27539 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GDF1P27539 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
GDF1P27539 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.15■□□□□ 0.34
GDF1P27539 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
GDF1P27539 AC120498.9-201ENST00000339021 3867 ntBASIC17.15■□□□□ 0.34
GDF1P27539 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
GDF1P27539 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.14■□□□□ 0.34
GDF1P27539 AC141586.3-201ENST00000562166 1838 ntBASIC17.14■□□□□ 0.34
GDF1P27539 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
GDF1P27539 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GDF1P27539 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
GDF1P27539 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.14■□□□□ 0.33
GDF1P27539 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GDF1P27539 AL032819.2-201ENST00000624543 2162 ntBASIC17.14■□□□□ 0.33
GDF1P27539 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GDF1P27539 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GDF1P27539 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GDF1P27539 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GDF1P27539 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms