Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD40P25942 GPAT2P1-201ENST00000444924 1672 ntBASIC16.34■□□□□ 0.21
CD40P25942 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CD40P25942 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CD40P25942 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CD40P25942 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.33■□□□□ 0.21
CD40P25942 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD40P25942 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.33■□□□□ 0.2
CD40P25942 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD40P25942 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD40P25942 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.33■□□□□ 0.2
CD40P25942 FAM8A6P-201ENST00000407496 1135 ntBASIC16.33■□□□□ 0.2
CD40P25942 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.33■□□□□ 0.2
CD40P25942 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.33■□□□□ 0.2
CD40P25942 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.33■□□□□ 0.2
CD40P25942 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CD40P25942 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.33■□□□□ 0.2
CD40P25942 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CD40P25942 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.33■□□□□ 0.2
CD40P25942 NEK4P2-201ENST00000580004 1012 ntBASIC16.33■□□□□ 0.2
CD40P25942 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.33■□□□□ 0.2
CD40P25942 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.33■□□□□ 0.2
CD40P25942 CR769767.2-201ENST00000622735 460 ntBASIC16.33■□□□□ 0.2
CD40P25942 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD40P25942 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD40P25942 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD40P25942 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD40P25942 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD40P25942 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD40P25942 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CD40P25942 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CD40P25942 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD40P25942 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CD40P25942 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.33■□□□□ 0.2
CD40P25942 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CD40P25942 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.33■□□□□ 0.2
CD40P25942 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD40P25942 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CD40P25942 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD40P25942 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD40P25942 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.32■□□□□ 0.2
CD40P25942 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CD40P25942 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD40P25942 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.32■□□□□ 0.2
CD40P25942 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD40P25942 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CD40P25942 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CD40P25942 FEM1AP3-201ENST00000403722 1741 ntBASIC16.32■□□□□ 0.2
CD40P25942 AL023284.2-201ENST00000405850 579 ntBASIC16.32■□□□□ 0.2
CD40P25942 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD40P25942 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD40P25942 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CD40P25942 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.32■□□□□ 0.2
CD40P25942 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CD40P25942 AL441883.1-201ENST00000566170 1045 ntBASIC16.32■□□□□ 0.2
CD40P25942 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CD40P25942 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CD40P25942 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.32■□□□□ 0.2
CD40P25942 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.32■□□□□ 0.2
CD40P25942 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD40P25942 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CD40P25942 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD40P25942 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.31■□□□□ 0.2
CD40P25942 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD40P25942 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD40P25942 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.31■□□□□ 0.2
CD40P25942 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD40P25942 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.31■□□□□ 0.2
CD40P25942 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.31■□□□□ 0.2
CD40P25942 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.31■□□□□ 0.2
CD40P25942 MCCD1P1-208ENST00000445732 328 ntBASIC16.31■□□□□ 0.2
CD40P25942 HOMER2P1-201ENST00000455653 964 ntBASIC16.31■□□□□ 0.2
CD40P25942 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.31■□□□□ 0.2
CD40P25942 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.31■□□□□ 0.2
CD40P25942 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.31■□□□□ 0.2
CD40P25942 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD40P25942 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD40P25942 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.31■□□□□ 0.2
CD40P25942 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.31■□□□□ 0.2
CD40P25942 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CD40P25942 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.31■□□□□ 0.2
CD40P25942 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CD40P25942 AC141586.3-201ENST00000562166 1838 ntBASIC16.31■□□□□ 0.2
CD40P25942 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD40P25942 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CD40P25942 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD40P25942 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD40P25942 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CD40P25942 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
CD40P25942 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD40P25942 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD40P25942 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CD40P25942 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.3■□□□□ 0.2
CD40P25942 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.3■□□□□ 0.2
CD40P25942 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CD40P25942 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.3■□□□□ 0.2
CD40P25942 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.3■□□□□ 0.2
CD40P25942 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.3■□□□□ 0.2
CD40P25942 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.3■□□□□ 0.2
CD40P25942 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms