Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.89■■□□□ 1.1
ERCC3P19447 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
ERCC3P19447 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
ERCC3P19447 STARP1-201ENST00000397973 869 ntBASIC21.89■■□□□ 1.09
ERCC3P19447 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
ERCC3P19447 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
ERCC3P19447 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.89■■□□□ 1.09
ERCC3P19447 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.89■■□□□ 1.09
ERCC3P19447 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.89■■□□□ 1.09
ERCC3P19447 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.89■■□□□ 1.09
ERCC3P19447 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
ERCC3P19447 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ERCC3P19447 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ERCC3P19447 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ERCC3P19447 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
ERCC3P19447 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
ERCC3P19447 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.88■■□□□ 1.09
ERCC3P19447 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ERCC3P19447 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ERCC3P19447 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.88■■□□□ 1.09
ERCC3P19447 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.88■■□□□ 1.09
ERCC3P19447 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.88■■□□□ 1.09
ERCC3P19447 ZNF444P1-201ENST00000559497 298 ntBASIC21.88■■□□□ 1.09
ERCC3P19447 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.88■■□□□ 1.09
ERCC3P19447 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.88■■□□□ 1.09
ERCC3P19447 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ERCC3P19447 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
ERCC3P19447 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
ERCC3P19447 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
ERCC3P19447 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
ERCC3P19447 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
ERCC3P19447 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.87■■□□□ 1.09
ERCC3P19447 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.87■■□□□ 1.09
ERCC3P19447 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.87■■□□□ 1.09
ERCC3P19447 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ERCC3P19447 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
ERCC3P19447 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ERCC3P19447 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ERCC3P19447 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.87■■□□□ 1.09
ERCC3P19447 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
ERCC3P19447 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
ERCC3P19447 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ERCC3P19447 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ERCC3P19447 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ERCC3P19447 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.87■■□□□ 1.09
ERCC3P19447 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.87■■□□□ 1.09
ERCC3P19447 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.87■■□□□ 1.09
ERCC3P19447 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ERCC3P19447 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ERCC3P19447 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
ERCC3P19447 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
ERCC3P19447 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.87■■□□□ 1.09
ERCC3P19447 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
ERCC3P19447 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.87■■□□□ 1.09
ERCC3P19447 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
ERCC3P19447 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
ERCC3P19447 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
ERCC3P19447 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ERCC3P19447 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ERCC3P19447 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
ERCC3P19447 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ERCC3P19447 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.86■■□□□ 1.09
ERCC3P19447 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
ERCC3P19447 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
ERCC3P19447 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ERCC3P19447 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.86■■□□□ 1.09
ERCC3P19447 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.86■■□□□ 1.09
ERCC3P19447 SPDYE15P-201ENST00000424157 909 ntBASIC21.86■■□□□ 1.09
ERCC3P19447 DUSP5P1-201ENST00000441325 1139 ntBASIC21.86■■□□□ 1.09
ERCC3P19447 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.86■■□□□ 1.09
ERCC3P19447 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ERCC3P19447 AC069148.1-201ENST00000608741 768 ntBASIC21.86■■□□□ 1.09
ERCC3P19447 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.86■■□□□ 1.09
ERCC3P19447 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ERCC3P19447 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
ERCC3P19447 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
ERCC3P19447 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
ERCC3P19447 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
ERCC3P19447 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.86■■□□□ 1.09
ERCC3P19447 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
ERCC3P19447 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
ERCC3P19447 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ERCC3P19447 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.85■■□□□ 1.09
ERCC3P19447 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ERCC3P19447 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ERCC3P19447 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.85■■□□□ 1.09
ERCC3P19447 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.85■■□□□ 1.09
ERCC3P19447 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ERCC3P19447 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.85■■□□□ 1.09
ERCC3P19447 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC21.85■■□□□ 1.09
ERCC3P19447 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.85■■□□□ 1.09
ERCC3P19447 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
ERCC3P19447 HCG4P8-203ENST00000443049 980 ntBASIC21.85■■□□□ 1.09
ERCC3P19447 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.85■■□□□ 1.09
ERCC3P19447 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
ERCC3P19447 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.85■■□□□ 1.09
ERCC3P19447 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.85■■□□□ 1.09
ERCC3P19447 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.85■■□□□ 1.09
ERCC3P19447 CR769767.2-201ENST00000622735 460 ntBASIC21.85■■□□□ 1.09
ERCC3P19447 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms