Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
SRPRAP08240 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
SRPRAP08240 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SRPRAP08240 IRX1P1-201ENST00000438849 1838 ntBASIC19.13■□□□□ 0.65
SRPRAP08240 FP475955.4-201ENST00000623131 1990 ntBASIC19.13■□□□□ 0.65
SRPRAP08240 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRPRAP08240 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRPRAP08240 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.12■□□□□ 0.65
SRPRAP08240 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.12■□□□□ 0.65
SRPRAP08240 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.12■□□□□ 0.65
SRPRAP08240 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.12■□□□□ 0.65
SRPRAP08240 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRPRAP08240 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
SRPRAP08240 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
SRPRAP08240 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRPRAP08240 AL031133.1-201ENST00000406807 723 ntBASIC19.12■□□□□ 0.65
SRPRAP08240 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SRPRAP08240 GCSHP2-201ENST00000560971 527 ntBASIC19.12■□□□□ 0.65
SRPRAP08240 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
SRPRAP08240 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.12■□□□□ 0.65
SRPRAP08240 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.12■□□□□ 0.65
SRPRAP08240 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.12■□□□□ 0.65
SRPRAP08240 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SRPRAP08240 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SRPRAP08240 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SRPRAP08240 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRPRAP08240 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SRPRAP08240 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SRPRAP08240 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRPRAP08240 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.11■□□□□ 0.65
SRPRAP08240 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.11■□□□□ 0.65
SRPRAP08240 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.11■□□□□ 0.65
SRPRAP08240 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRPRAP08240 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SRPRAP08240 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SRPRAP08240 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRPRAP08240 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.11■□□□□ 0.65
SRPRAP08240 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRPRAP08240 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRPRAP08240 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRPRAP08240 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.11■□□□□ 0.65
SRPRAP08240 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SRPRAP08240 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.11■□□□□ 0.65
SRPRAP08240 AL359075.1-203ENST00000462729 1002 ntBASIC19.11■□□□□ 0.65
SRPRAP08240 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.11■□□□□ 0.65
SRPRAP08240 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.11■□□□□ 0.65
SRPRAP08240 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.11■□□□□ 0.65
SRPRAP08240 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.11■□□□□ 0.65
SRPRAP08240 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.11■□□□□ 0.65
SRPRAP08240 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.11■□□□□ 0.65
SRPRAP08240 AL512353.2-201ENST00000448759 1962 ntBASIC19.11■□□□□ 0.65
SRPRAP08240 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.11■□□□□ 0.65
SRPRAP08240 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
SRPRAP08240 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SRPRAP08240 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.1■□□□□ 0.65
SRPRAP08240 AC036111.1-201ENST00000533973 1582 ntBASIC19.1■□□□□ 0.65
SRPRAP08240 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.1■□□□□ 0.65
SRPRAP08240 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRPRAP08240 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.1■□□□□ 0.65
SRPRAP08240 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
SRPRAP08240 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SRPRAP08240 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SRPRAP08240 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRPRAP08240 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.1■□□□□ 0.65
SRPRAP08240 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRPRAP08240 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRPRAP08240 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRPRAP08240 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.1■□□□□ 0.65
SRPRAP08240 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRPRAP08240 STARP1-201ENST00000397973 869 ntBASIC19.1■□□□□ 0.65
SRPRAP08240 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
SRPRAP08240 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRPRAP08240 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRPRAP08240 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.1■□□□□ 0.65
SRPRAP08240 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.1■□□□□ 0.65
SRPRAP08240 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRPRAP08240 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.1■□□□□ 0.65
SRPRAP08240 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.1■□□□□ 0.65
SRPRAP08240 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SRPRAP08240 AL109659.2-201ENST00000606809 1674 ntBASIC19.1■□□□□ 0.65
SRPRAP08240 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SRPRAP08240 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SRPRAP08240 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
SRPRAP08240 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRPRAP08240 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SRPRAP08240 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SRPRAP08240 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SRPRAP08240 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRPRAP08240 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SRPRAP08240 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SRPRAP08240 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.09■□□□□ 0.65
SRPRAP08240 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRPRAP08240 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
SRPRAP08240 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRPRAP08240 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRPRAP08240 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SRPRAP08240 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SRPRAP08240 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.09■□□□□ 0.65
SRPRAP08240 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.09■□□□□ 0.65
SRPRAP08240 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms