Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.48■□□□□ 0.87
TIMP1P01033 AC124864.1-201ENST00000623408 392 ntBASIC20.48■□□□□ 0.87
TIMP1P01033 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TIMP1P01033 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.48■□□□□ 0.87
TIMP1P01033 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TIMP1P01033 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
TIMP1P01033 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TIMP1P01033 AL109659.2-201ENST00000606809 1674 ntBASIC20.48■□□□□ 0.87
TIMP1P01033 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
TIMP1P01033 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TIMP1P01033 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.48■□□□□ 0.87
TIMP1P01033 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TIMP1P01033 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.47■□□□□ 0.87
TIMP1P01033 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
TIMP1P01033 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.47■□□□□ 0.87
TIMP1P01033 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TIMP1P01033 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TIMP1P01033 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TIMP1P01033 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.47■□□□□ 0.87
TIMP1P01033 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.47■□□□□ 0.87
TIMP1P01033 GUSBP12-201ENST00000513727 720 ntBASIC20.47■□□□□ 0.87
TIMP1P01033 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.47■□□□□ 0.87
TIMP1P01033 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.47■□□□□ 0.87
TIMP1P01033 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TIMP1P01033 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.47■□□□□ 0.87
TIMP1P01033 AL592071.1-201ENST00000611956 408 ntBASIC20.47■□□□□ 0.87
TIMP1P01033 AL773604.1-201ENST00000617417 272 ntBASIC20.47■□□□□ 0.87
TIMP1P01033 TP73-AS1-207ENST00000624167 988 ntBASIC20.47■□□□□ 0.87
TIMP1P01033 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TIMP1P01033 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.47■□□□□ 0.87
TIMP1P01033 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TIMP1P01033 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.47■□□□□ 0.87
TIMP1P01033 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TIMP1P01033 NSUN5P1-202ENST00000421140 1535 ntBASIC20.47■□□□□ 0.87
TIMP1P01033 NSUN5P2-203ENST00000457352 1529 ntBASIC20.47■□□□□ 0.87
TIMP1P01033 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TIMP1P01033 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TIMP1P01033 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TIMP1P01033 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TIMP1P01033 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.46■□□□□ 0.87
TIMP1P01033 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TIMP1P01033 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TIMP1P01033 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
TIMP1P01033 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
TIMP1P01033 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TIMP1P01033 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TIMP1P01033 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TIMP1P01033 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TIMP1P01033 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.46■□□□□ 0.87
TIMP1P01033 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TIMP1P01033 RN7SL606P-201ENST00000472779 293 ntBASIC20.46■□□□□ 0.87
TIMP1P01033 SLC25A1P1-201ENST00000528351 927 ntBASIC20.46■□□□□ 0.87
TIMP1P01033 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.46■□□□□ 0.87
TIMP1P01033 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TIMP1P01033 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TIMP1P01033 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TIMP1P01033 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TIMP1P01033 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TIMP1P01033 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TIMP1P01033 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TIMP1P01033 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.45■□□□□ 0.86
TIMP1P01033 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TIMP1P01033 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.45■□□□□ 0.86
TIMP1P01033 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TIMP1P01033 IGHGP-201ENST00000390555 1178 ntBASIC20.45■□□□□ 0.86
TIMP1P01033 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TIMP1P01033 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TIMP1P01033 FAM197Y8-203ENST00000450145 560 ntBASIC20.45■□□□□ 0.86
TIMP1P01033 VENTXP7-201ENST00000475503 772 ntBASIC20.45■□□□□ 0.86
TIMP1P01033 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.45■□□□□ 0.86
TIMP1P01033 KRT18P58-201ENST00000527480 1120 ntBASIC20.45■□□□□ 0.86
TIMP1P01033 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.45■□□□□ 0.86
TIMP1P01033 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.45■□□□□ 0.86
TIMP1P01033 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
TIMP1P01033 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TIMP1P01033 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.45■□□□□ 0.86
TIMP1P01033 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TIMP1P01033 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
TIMP1P01033 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.45■□□□□ 0.86
TIMP1P01033 AC073314.1-201ENST00000568729 2216 ntBASIC20.45■□□□□ 0.86
TIMP1P01033 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
TIMP1P01033 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TIMP1P01033 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
TIMP1P01033 AL162377.1-201ENST00000618844 1793 ntBASIC20.44■□□□□ 0.86
TIMP1P01033 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TIMP1P01033 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
TIMP1P01033 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TIMP1P01033 NUS1P2-201ENST00000417358 873 ntBASIC20.44■□□□□ 0.86
TIMP1P01033 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TIMP1P01033 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.44■□□□□ 0.86
TIMP1P01033 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.44■□□□□ 0.86
TIMP1P01033 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.44■□□□□ 0.86
TIMP1P01033 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TIMP1P01033 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TIMP1P01033 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TIMP1P01033 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TIMP1P01033 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TIMP1P01033 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TIMP1P01033 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
TIMP1P01033 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms