Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSPG5O95196 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CSPG5O95196 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CSPG5O95196 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSPG5O95196 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSPG5O95196 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSPG5O95196 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSPG5O95196 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.3■□□□□ 0.84
CSPG5O95196 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CSPG5O95196 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.3■□□□□ 0.84
CSPG5O95196 RASA4DP-201ENST00000460726 1199 ntBASIC20.3■□□□□ 0.84
CSPG5O95196 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CSPG5O95196 UNC93B7-201ENST00000509439 705 ntBASIC20.3■□□□□ 0.84
CSPG5O95196 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.3■□□□□ 0.84
CSPG5O95196 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CSPG5O95196 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSPG5O95196 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.3■□□□□ 0.84
CSPG5O95196 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.3■□□□□ 0.84
CSPG5O95196 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CSPG5O95196 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CSPG5O95196 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CSPG5O95196 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSPG5O95196 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.3■□□□□ 0.84
CSPG5O95196 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.29■□□□□ 0.84
CSPG5O95196 AC036111.1-201ENST00000533973 1582 ntBASIC20.29■□□□□ 0.84
CSPG5O95196 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSPG5O95196 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CSPG5O95196 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSPG5O95196 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSPG5O95196 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.29■□□□□ 0.84
CSPG5O95196 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSPG5O95196 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSPG5O95196 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CSPG5O95196 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSPG5O95196 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.29■□□□□ 0.84
CSPG5O95196 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CSPG5O95196 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CSPG5O95196 TSSC2-201ENST00000450217 709 ntBASIC20.29■□□□□ 0.84
CSPG5O95196 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.29■□□□□ 0.84
CSPG5O95196 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.29■□□□□ 0.84
CSPG5O95196 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.29■□□□□ 0.84
CSPG5O95196 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
CSPG5O95196 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.29■□□□□ 0.84
CSPG5O95196 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.29■□□□□ 0.84
CSPG5O95196 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSPG5O95196 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSPG5O95196 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.29■□□□□ 0.84
CSPG5O95196 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CSPG5O95196 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSPG5O95196 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CSPG5O95196 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSPG5O95196 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSPG5O95196 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSPG5O95196 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSPG5O95196 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CSPG5O95196 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CSPG5O95196 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CSPG5O95196 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSPG5O95196 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSPG5O95196 PVRIG2P-201ENST00000435460 978 ntBASIC20.28■□□□□ 0.84
CSPG5O95196 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.28■□□□□ 0.84
CSPG5O95196 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.28■□□□□ 0.84
CSPG5O95196 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CSPG5O95196 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSPG5O95196 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CSPG5O95196 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CSPG5O95196 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.27■□□□□ 0.84
CSPG5O95196 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CSPG5O95196 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
CSPG5O95196 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CSPG5O95196 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CSPG5O95196 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CSPG5O95196 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CSPG5O95196 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CSPG5O95196 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSPG5O95196 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSPG5O95196 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSPG5O95196 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.27■□□□□ 0.84
CSPG5O95196 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSPG5O95196 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
CSPG5O95196 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.27■□□□□ 0.84
CSPG5O95196 BX276092.5-203ENST00000456199 560 ntBASIC20.27■□□□□ 0.84
CSPG5O95196 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.27■□□□□ 0.84
CSPG5O95196 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
CSPG5O95196 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.27■□□□□ 0.84
CSPG5O95196 AC111152.3-201ENST00000569699 673 ntBASIC20.27■□□□□ 0.84
CSPG5O95196 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CSPG5O95196 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSPG5O95196 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CSPG5O95196 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.27■□□□□ 0.83
CSPG5O95196 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.26■□□□□ 0.83
CSPG5O95196 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.26■□□□□ 0.83
CSPG5O95196 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CSPG5O95196 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.26■□□□□ 0.83
CSPG5O95196 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.26■□□□□ 0.83
CSPG5O95196 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.26■□□□□ 0.83
CSPG5O95196 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSPG5O95196 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.26■□□□□ 0.83
CSPG5O95196 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSPG5O95196 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms