Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CEACAM4O75871 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CEACAM4O75871 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CEACAM4O75871 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CEACAM4O75871 AL512353.2-201ENST00000448759 1962 ntBASIC17.2■□□□□ 0.34
CEACAM4O75871 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CEACAM4O75871 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.2■□□□□ 0.34
CEACAM4O75871 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CEACAM4O75871 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.2■□□□□ 0.34
CEACAM4O75871 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CEACAM4O75871 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.2■□□□□ 0.34
CEACAM4O75871 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CEACAM4O75871 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CEACAM4O75871 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.19■□□□□ 0.34
CEACAM4O75871 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEACAM4O75871 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEACAM4O75871 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.19■□□□□ 0.34
CEACAM4O75871 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEACAM4O75871 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CEACAM4O75871 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CEACAM4O75871 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.19■□□□□ 0.34
CEACAM4O75871 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.19■□□□□ 0.34
CEACAM4O75871 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.19■□□□□ 0.34
CEACAM4O75871 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CEACAM4O75871 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.19■□□□□ 0.34
CEACAM4O75871 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.19■□□□□ 0.34
CEACAM4O75871 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.19■□□□□ 0.34
CEACAM4O75871 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.19■□□□□ 0.34
CEACAM4O75871 RCC2P3-201ENST00000418112 1537 ntBASIC17.19■□□□□ 0.34
CEACAM4O75871 AL137060.1-201ENST00000618151 2648 ntBASIC17.19■□□□□ 0.34
CEACAM4O75871 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CEACAM4O75871 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.19■□□□□ 0.34
CEACAM4O75871 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.19■□□□□ 0.34
CEACAM4O75871 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEACAM4O75871 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEACAM4O75871 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CEACAM4O75871 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CEACAM4O75871 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CEACAM4O75871 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CEACAM4O75871 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CEACAM4O75871 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CEACAM4O75871 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CEACAM4O75871 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CEACAM4O75871 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.18■□□□□ 0.34
CEACAM4O75871 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CEACAM4O75871 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CEACAM4O75871 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.18■□□□□ 0.34
CEACAM4O75871 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CEACAM4O75871 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CEACAM4O75871 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CEACAM4O75871 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CEACAM4O75871 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CEACAM4O75871 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CEACAM4O75871 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CEACAM4O75871 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CEACAM4O75871 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.18■□□□□ 0.34
CEACAM4O75871 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CEACAM4O75871 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CEACAM4O75871 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CEACAM4O75871 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.18■□□□□ 0.34
CEACAM4O75871 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CEACAM4O75871 AC012615.1-201ENST00000565797 1299 ntBASIC17.18■□□□□ 0.34
CEACAM4O75871 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.18■□□□□ 0.34
CEACAM4O75871 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CEACAM4O75871 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CEACAM4O75871 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CEACAM4O75871 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CEACAM4O75871 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CEACAM4O75871 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CEACAM4O75871 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.17■□□□□ 0.34
CEACAM4O75871 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CEACAM4O75871 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CEACAM4O75871 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.17■□□□□ 0.34
CEACAM4O75871 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CEACAM4O75871 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CEACAM4O75871 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CEACAM4O75871 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CEACAM4O75871 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.17■□□□□ 0.34
CEACAM4O75871 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CEACAM4O75871 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.17■□□□□ 0.34
CEACAM4O75871 MIR3180-4-201ENST00000582223 153 ntBASIC17.17■□□□□ 0.34
CEACAM4O75871 AL121772.3-201ENST00000610840 674 ntBASIC17.17■□□□□ 0.34
CEACAM4O75871 AC008556.1-201ENST00000610908 2040 ntBASIC17.17■□□□□ 0.34
CEACAM4O75871 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CEACAM4O75871 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CEACAM4O75871 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CEACAM4O75871 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CEACAM4O75871 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.17■□□□□ 0.34
CEACAM4O75871 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.17■□□□□ 0.34
CEACAM4O75871 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.17■□□□□ 0.34
CEACAM4O75871 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.17■□□□□ 0.34
CEACAM4O75871 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.17■□□□□ 0.34
CEACAM4O75871 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CEACAM4O75871 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CEACAM4O75871 TEX21P-204ENST00000641479 1693 ntBASIC17.16■□□□□ 0.34
CEACAM4O75871 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CEACAM4O75871 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CEACAM4O75871 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CEACAM4O75871 Z82202.1-201ENST00000623446 1880 ntBASIC17.16■□□□□ 0.34
CEACAM4O75871 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms