Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHGA12O60330 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHGA12O60330 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
PCDHGA12O60330 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
PCDHGA12O60330 LINC01465-201ENST00000408887 1940 ntBASIC18.76■□□□□ 0.59
PCDHGA12O60330 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA12O60330 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGA12O60330 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGA12O60330 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.76■□□□□ 0.59
PCDHGA12O60330 AC098818.2-201ENST00000564925 2320 ntBASIC18.76■□□□□ 0.59
PCDHGA12O60330 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDHGA12O60330 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.76■□□□□ 0.59
PCDHGA12O60330 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA12O60330 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCDHGA12O60330 STARP1-201ENST00000397973 869 ntBASIC18.76■□□□□ 0.59
PCDHGA12O60330 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PCDHGA12O60330 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.76■□□□□ 0.59
PCDHGA12O60330 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.76■□□□□ 0.59
PCDHGA12O60330 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHGA12O60330 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA12O60330 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.76■□□□□ 0.59
PCDHGA12O60330 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA12O60330 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
PCDHGA12O60330 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA12O60330 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PCDHGA12O60330 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA12O60330 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA12O60330 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCDHGA12O60330 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHGA12O60330 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA12O60330 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA12O60330 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA12O60330 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA12O60330 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PCDHGA12O60330 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA12O60330 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PCDHGA12O60330 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA12O60330 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA12O60330 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA12O60330 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGA12O60330 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PCDHGA12O60330 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA12O60330 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.75■□□□□ 0.59
PCDHGA12O60330 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA12O60330 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.75■□□□□ 0.59
PCDHGA12O60330 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGA12O60330 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHGA12O60330 ZNF444P1-201ENST00000559497 298 ntBASIC18.75■□□□□ 0.59
PCDHGA12O60330 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHGA12O60330 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.75■□□□□ 0.59
PCDHGA12O60330 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA12O60330 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA12O60330 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA12O60330 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHGA12O60330 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA12O60330 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDHGA12O60330 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PCDHGA12O60330 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHGA12O60330 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA12O60330 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGA12O60330 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGA12O60330 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA12O60330 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA12O60330 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA12O60330 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA12O60330 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA12O60330 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHGA12O60330 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PCDHGA12O60330 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA12O60330 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA12O60330 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA12O60330 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PCDHGA12O60330 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDHGA12O60330 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA12O60330 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDHGA12O60330 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA12O60330 AC112907.2-201ENST00000448639 330 ntBASIC18.74■□□□□ 0.59
PCDHGA12O60330 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGA12O60330 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHGA12O60330 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGA12O60330 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGA12O60330 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
PCDHGA12O60330 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHGA12O60330 CLEC4GP1-201ENST00000596555 870 ntBASIC18.74■□□□□ 0.59
PCDHGA12O60330 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDHGA12O60330 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGA12O60330 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA12O60330 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGA12O60330 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHGA12O60330 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHGA12O60330 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHGA12O60330 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PCDHGA12O60330 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHGA12O60330 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PCDHGA12O60330 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHGA12O60330 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA12O60330 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA12O60330 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHGA12O60330 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHGA12O60330 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms