Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PRKNO60260 AC116562.4-202ENST00000641738 218 ntBASIC17.62■□□□□ 0.41
PRKNO60260 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRKNO60260 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.62■□□□□ 0.41
PRKNO60260 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRKNO60260 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PRKNO60260 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.62■□□□□ 0.41
PRKNO60260 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.62■□□□□ 0.41
PRKNO60260 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PRKNO60260 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRKNO60260 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PRKNO60260 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRKNO60260 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRKNO60260 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRKNO60260 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRKNO60260 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.61■□□□□ 0.41
PRKNO60260 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRKNO60260 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRKNO60260 AC113347.1-201ENST00000413321 391 ntBASIC17.61■□□□□ 0.41
PRKNO60260 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.61■□□□□ 0.41
PRKNO60260 FAM210CP-201ENST00000445714 574 ntBASIC17.61■□□□□ 0.41
PRKNO60260 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.61■□□□□ 0.41
PRKNO60260 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.61■□□□□ 0.41
PRKNO60260 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRKNO60260 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PRKNO60260 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PRKNO60260 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRKNO60260 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PRKNO60260 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PRKNO60260 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
PRKNO60260 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRKNO60260 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRKNO60260 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRKNO60260 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
PRKNO60260 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRKNO60260 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRKNO60260 TERF1P1-201ENST00000311003 1181 ntBASIC17.6■□□□□ 0.41
PRKNO60260 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRKNO60260 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.6■□□□□ 0.41
PRKNO60260 KRT18P57-201ENST00000443599 1254 ntBASIC17.6■□□□□ 0.41
PRKNO60260 CCR12P-201ENST00000446203 998 ntBASIC17.6■□□□□ 0.41
PRKNO60260 CA15P1-201ENST00000481698 905 ntBASIC17.6■□□□□ 0.41
PRKNO60260 AC128688.1-201ENST00000487626 519 ntBASIC17.6■□□□□ 0.41
PRKNO60260 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.6■□□□□ 0.41
PRKNO60260 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.6■□□□□ 0.41
PRKNO60260 AL353719.1-201ENST00000566847 864 ntBASIC17.6■□□□□ 0.41
PRKNO60260 RN7SL850P-201ENST00000579959 291 ntBASIC17.6■□□□□ 0.41
PRKNO60260 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
PRKNO60260 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRKNO60260 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.6■□□□□ 0.41
PRKNO60260 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.6■□□□□ 0.41
PRKNO60260 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRKNO60260 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRKNO60260 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
PRKNO60260 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRKNO60260 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.6■□□□□ 0.41
PRKNO60260 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PRKNO60260 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PRKNO60260 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRKNO60260 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRKNO60260 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.59■□□□□ 0.41
PRKNO60260 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRKNO60260 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PRKNO60260 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
PRKNO60260 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.59■□□□□ 0.41
PRKNO60260 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.59■□□□□ 0.41
PRKNO60260 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRKNO60260 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.59■□□□□ 0.41
PRKNO60260 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRKNO60260 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.59■□□□□ 0.41
PRKNO60260 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.59■□□□□ 0.41
PRKNO60260 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRKNO60260 AP003041.3-201ENST00000527151 707 ntBASIC17.59■□□□□ 0.41
PRKNO60260 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
PRKNO60260 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
PRKNO60260 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.59■□□□□ 0.41
PRKNO60260 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.59■□□□□ 0.41
PRKNO60260 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRKNO60260 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRKNO60260 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRKNO60260 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRKNO60260 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PRKNO60260 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PRKNO60260 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PRKNO60260 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PRKNO60260 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.58■□□□□ 0.41
PRKNO60260 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PRKNO60260 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PRKNO60260 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PRKNO60260 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.58■□□□□ 0.41
PRKNO60260 AC073508.3-201ENST00000619697 1419 ntBASIC17.58■□□□□ 0.41
PRKNO60260 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
PRKNO60260 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PRKNO60260 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.58■□□□□ 0.4
PRKNO60260 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
PRKNO60260 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.58■□□□□ 0.4
PRKNO60260 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.58■□□□□ 0.4
PRKNO60260 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.58■□□□□ 0.4
PRKNO60260 TSPY17P-201ENST00000450329 467 ntBASIC17.58■□□□□ 0.4
PRKNO60260 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms