Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
XRCC2O43543 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
XRCC2O43543 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
XRCC2O43543 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
XRCC2O43543 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
XRCC2O43543 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
XRCC2O43543 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
XRCC2O43543 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
XRCC2O43543 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
XRCC2O43543 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
XRCC2O43543 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
XRCC2O43543 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.46■□□□□ 0.23
XRCC2O43543 AL135905.2-201ENST00000584934 1404 ntBASIC16.46■□□□□ 0.23
XRCC2O43543 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.46■□□□□ 0.23
XRCC2O43543 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
XRCC2O43543 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
XRCC2O43543 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
XRCC2O43543 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
XRCC2O43543 FDX2-207ENST00000494368 584 ntTSL 4 BASIC16.46■□□□□ 0.23
XRCC2O43543 PRSS44-201ENST00000515154 1146 ntBASIC16.46■□□□□ 0.23
XRCC2O43543 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
XRCC2O43543 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
XRCC2O43543 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.46■□□□□ 0.23
XRCC2O43543 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.46■□□□□ 0.23
XRCC2O43543 AC073195.1-201ENST00000607241 877 ntBASIC16.46■□□□□ 0.23
XRCC2O43543 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
XRCC2O43543 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
XRCC2O43543 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
XRCC2O43543 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
XRCC2O43543 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.46■□□□□ 0.23
XRCC2O43543 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
XRCC2O43543 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
XRCC2O43543 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
XRCC2O43543 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
XRCC2O43543 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
XRCC2O43543 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
XRCC2O43543 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
XRCC2O43543 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
XRCC2O43543 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
XRCC2O43543 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.45■□□□□ 0.22
XRCC2O43543 AC093503.3-201ENST00000624917 2352 ntBASIC16.45■□□□□ 0.22
XRCC2O43543 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC2O43543 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
XRCC2O43543 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC2O43543 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC2O43543 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC2O43543 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC2O43543 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC2O43543 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
XRCC2O43543 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC2O43543 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.45■□□□□ 0.22
XRCC2O43543 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.45■□□□□ 0.22
XRCC2O43543 RPS2P4-201ENST00000476944 856 ntBASIC16.45■□□□□ 0.22
XRCC2O43543 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.45■□□□□ 0.22
XRCC2O43543 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.45■□□□□ 0.22
XRCC2O43543 AF186192.3-201ENST00000583427 947 ntBASIC16.45■□□□□ 0.22
XRCC2O43543 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.45■□□□□ 0.22
XRCC2O43543 AL031985.4-201ENST00000642138 673 ntBASIC16.45■□□□□ 0.22
XRCC2O43543 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC2O43543 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC2O43543 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.45■□□□□ 0.22
XRCC2O43543 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC2O43543 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.45■□□□□ 0.22
XRCC2O43543 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC2O43543 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
XRCC2O43543 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
XRCC2O43543 AC026471.1-201ENST00000564629 3026 ntBASIC16.45■□□□□ 0.22
XRCC2O43543 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC2O43543 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC2O43543 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC2O43543 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.45■□□□□ 0.22
XRCC2O43543 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.45■□□□□ 0.22
XRCC2O43543 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC2O43543 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC2O43543 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
XRCC2O43543 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
XRCC2O43543 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
XRCC2O43543 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.44■□□□□ 0.22
XRCC2O43543 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
XRCC2O43543 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
XRCC2O43543 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
XRCC2O43543 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
XRCC2O43543 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
XRCC2O43543 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
XRCC2O43543 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
XRCC2O43543 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
XRCC2O43543 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
XRCC2O43543 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
XRCC2O43543 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.44■□□□□ 0.22
XRCC2O43543 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
XRCC2O43543 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.44■□□□□ 0.22
XRCC2O43543 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.44■□□□□ 0.22
XRCC2O43543 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
XRCC2O43543 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.44■□□□□ 0.22
XRCC2O43543 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.44■□□□□ 0.22
XRCC2O43543 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.44■□□□□ 0.22
XRCC2O43543 CR392000.1-201ENST00000624770 1228 ntBASIC16.44■□□□□ 0.22
XRCC2O43543 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.44■□□□□ 0.22
XRCC2O43543 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
XRCC2O43543 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms