Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CHD2O14647 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
CHD2O14647 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CHD2O14647 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CHD2O14647 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CHD2O14647 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC26.36■■□□□ 1.81
CHD2O14647 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CHD2O14647 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
CHD2O14647 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC26.36■■□□□ 1.81
CHD2O14647 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CHD2O14647 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
CHD2O14647 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CHD2O14647 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CHD2O14647 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC26.36■■□□□ 1.81
CHD2O14647 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC26.36■■□□□ 1.81
CHD2O14647 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CHD2O14647 PBK-203ENST00000522944 1499 ntTSL 2 BASIC26.35■■□□□ 1.81
CHD2O14647 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHD2O14647 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
CHD2O14647 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
CHD2O14647 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHD2O14647 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC26.35■■□□□ 1.81
CHD2O14647 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHD2O14647 RN7SL606P-201ENST00000472779 293 ntBASIC26.35■■□□□ 1.81
CHD2O14647 RNPS1P1-201ENST00000507437 918 ntBASIC26.35■■□□□ 1.81
CHD2O14647 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC26.35■■□□□ 1.81
CHD2O14647 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC26.35■■□□□ 1.81
CHD2O14647 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
CHD2O14647 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC26.35■■□□□ 1.81
CHD2O14647 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHD2O14647 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHD2O14647 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC26.35■■□□□ 1.81
CHD2O14647 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHD2O14647 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC26.35■■□□□ 1.81
CHD2O14647 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CHD2O14647 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC26.35■■□□□ 1.81
CHD2O14647 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CHD2O14647 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHD2O14647 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC26.35■■□□□ 1.81
CHD2O14647 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CHD2O14647 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC26.35■■□□□ 1.81
CHD2O14647 AC064862.7-201ENST00000604520 867 ntBASIC26.35■■□□□ 1.81
CHD2O14647 AC008608.2-201ENST00000606089 416 ntBASIC26.35■■□□□ 1.81
CHD2O14647 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHD2O14647 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CHD2O14647 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC26.34■■□□□ 1.81
CHD2O14647 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
CHD2O14647 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHD2O14647 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
CHD2O14647 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CHD2O14647 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC26.34■■□□□ 1.81
CHD2O14647 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHD2O14647 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
CHD2O14647 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC26.34■■□□□ 1.81
CHD2O14647 AC073648.2-201ENST00000510116 352 ntBASIC26.34■■□□□ 1.81
CHD2O14647 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC26.34■■□□□ 1.81
CHD2O14647 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
CHD2O14647 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC26.33■■□□□ 1.81
CHD2O14647 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CHD2O14647 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC26.33■■□□□ 1.81
CHD2O14647 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.81
CHD2O14647 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC26.33■■□□□ 1.81
CHD2O14647 PGAM5P1-201ENST00000518923 814 ntBASIC26.33■■□□□ 1.81
CHD2O14647 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC26.33■■□□□ 1.81
CHD2O14647 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC26.33■■□□□ 1.81
CHD2O14647 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CHD2O14647 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC26.33■■□□□ 1.81
CHD2O14647 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
CHD2O14647 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC26.33■■□□□ 1.81
CHD2O14647 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CHD2O14647 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CHD2O14647 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CHD2O14647 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CHD2O14647 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
CHD2O14647 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CHD2O14647 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CHD2O14647 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC26.32■■□□□ 1.8
CHD2O14647 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
CHD2O14647 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC26.32■■□□□ 1.8
CHD2O14647 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC26.32■■□□□ 1.8
CHD2O14647 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
CHD2O14647 AL109659.2-201ENST00000606809 1674 ntBASIC26.32■■□□□ 1.8
CHD2O14647 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC26.32■■□□□ 1.8
CHD2O14647 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CHD2O14647 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CHD2O14647 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CHD2O14647 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC26.32■■□□□ 1.8
CHD2O14647 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC26.32■■□□□ 1.8
CHD2O14647 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CHD2O14647 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC26.32■■□□□ 1.8
CHD2O14647 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CHD2O14647 AC145285.3-201ENST00000564603 959 ntBASIC26.32■■□□□ 1.8
CHD2O14647 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC26.32■■□□□ 1.8
CHD2O14647 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHD2O14647 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CHD2O14647 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHD2O14647 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC26.31■■□□□ 1.8
CHD2O14647 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHD2O14647 MOK-208ENST00000519058 917 ntTSL 2 BASIC26.31■■□□□ 1.8
CHD2O14647 PPOX-214ENST00000535223 664 ntTSL 3 BASIC26.31■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms