Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 AL353719.1-201ENST00000566847 864 ntBASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 AL023803.3-201ENST00000615559 522 ntBASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 AC093484.2-201ENST00000580996 2166 ntBASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NPIPA2E9PIF3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA2E9PIF3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
NPIPA2E9PIF3 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA2E9PIF3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.24■□□□□ 0.35
NPIPA2E9PIF3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA2E9PIF3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.24■□□□□ 0.35
NPIPA2E9PIF3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
NPIPA2E9PIF3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.24■□□□□ 0.35
NPIPA2E9PIF3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA2E9PIF3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NPIPA2E9PIF3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA2E9PIF3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA2E9PIF3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA2E9PIF3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA2E9PIF3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.24■□□□□ 0.35
NPIPA2E9PIF3 AC117947.1-201ENST00000427448 529 ntBASIC17.24■□□□□ 0.35
NPIPA2E9PIF3 AC139887.4-201ENST00000607877 719 ntBASIC17.24■□□□□ 0.35
NPIPA2E9PIF3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA2E9PIF3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA2E9PIF3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA2E9PIF3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA2E9PIF3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA2E9PIF3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA2E9PIF3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA2E9PIF3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NPIPA2E9PIF3 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 AC007952.6-201ENST00000573168 2673 ntBASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 AC003957.1-201ENST00000625108 2673 ntBASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 CA15P1-201ENST00000481698 905 ntBASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 AL138966.2-201ENST00000621997 464 ntBASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 AC104417.2-201ENST00000562989 1793 ntBASIC17.23■□□□□ 0.35
NPIPA2E9PIF3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPIPA2E9PIF3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms