Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRRM3A6NNA2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.6■□□□□ 0.73
SRRM3A6NNA2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRRM3A6NNA2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SRRM3A6NNA2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SRRM3A6NNA2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRRM3A6NNA2 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRRM3A6NNA2 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRRM3A6NNA2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
SRRM3A6NNA2 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.59■□□□□ 0.73
SRRM3A6NNA2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRRM3A6NNA2 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SRRM3A6NNA2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRRM3A6NNA2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
SRRM3A6NNA2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRRM3A6NNA2 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRRM3A6NNA2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.59■□□□□ 0.73
SRRM3A6NNA2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SRRM3A6NNA2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
SRRM3A6NNA2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRRM3A6NNA2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRRM3A6NNA2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRRM3A6NNA2 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.59■□□□□ 0.73
SRRM3A6NNA2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SRRM3A6NNA2 RARRES2P10-201ENST00000564312 460 ntBASIC19.59■□□□□ 0.73
SRRM3A6NNA2 AC026471.5-201ENST00000615068 467 ntBASIC19.59■□□□□ 0.73
SRRM3A6NNA2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.59■□□□□ 0.73
SRRM3A6NNA2 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRRM3A6NNA2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.59■□□□□ 0.73
SRRM3A6NNA2 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRRM3A6NNA2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SRRM3A6NNA2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRRM3A6NNA2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRRM3A6NNA2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SRRM3A6NNA2 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRRM3A6NNA2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SRRM3A6NNA2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SRRM3A6NNA2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SRRM3A6NNA2 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
SRRM3A6NNA2 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.73
SRRM3A6NNA2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SRRM3A6NNA2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SRRM3A6NNA2 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SRRM3A6NNA2 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SRRM3A6NNA2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
SRRM3A6NNA2 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SRRM3A6NNA2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SRRM3A6NNA2 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.58■□□□□ 0.72
SRRM3A6NNA2 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.58■□□□□ 0.72
SRRM3A6NNA2 AP003071.4-201ENST00000562276 1284 ntBASIC19.58■□□□□ 0.72
SRRM3A6NNA2 AC087388.1-201ENST00000571370 1112 ntBASIC19.58■□□□□ 0.72
SRRM3A6NNA2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
SRRM3A6NNA2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SRRM3A6NNA2 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
SRRM3A6NNA2 ABALON-201ENST00000629058 1903 ntBASIC19.58■□□□□ 0.72
SRRM3A6NNA2 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.58■□□□□ 0.72
SRRM3A6NNA2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SRRM3A6NNA2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.58■□□□□ 0.72
SRRM3A6NNA2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
SRRM3A6NNA2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.58■□□□□ 0.72
SRRM3A6NNA2 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.58■□□□□ 0.72
SRRM3A6NNA2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
SRRM3A6NNA2 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SRRM3A6NNA2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.57■□□□□ 0.72
SRRM3A6NNA2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SRRM3A6NNA2 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SRRM3A6NNA2 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
SRRM3A6NNA2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.57■□□□□ 0.72
SRRM3A6NNA2 KRT18P57-201ENST00000443599 1254 ntBASIC19.57■□□□□ 0.72
SRRM3A6NNA2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.57■□□□□ 0.72
SRRM3A6NNA2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.57■□□□□ 0.72
SRRM3A6NNA2 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.57■□□□□ 0.72
SRRM3A6NNA2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SRRM3A6NNA2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.57■□□□□ 0.72
SRRM3A6NNA2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SRRM3A6NNA2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SRRM3A6NNA2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
SRRM3A6NNA2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SRRM3A6NNA2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SRRM3A6NNA2 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.57■□□□□ 0.72
SRRM3A6NNA2 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SRRM3A6NNA2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SRRM3A6NNA2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SRRM3A6NNA2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SRRM3A6NNA2 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.57■□□□□ 0.72
SRRM3A6NNA2 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SRRM3A6NNA2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SRRM3A6NNA2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SRRM3A6NNA2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.56■□□□□ 0.72
SRRM3A6NNA2 FP475955.4-201ENST00000623131 1990 ntBASIC19.56■□□□□ 0.72
SRRM3A6NNA2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SRRM3A6NNA2 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.56■□□□□ 0.72
SRRM3A6NNA2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SRRM3A6NNA2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.56■□□□□ 0.72
SRRM3A6NNA2 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.56■□□□□ 0.72
SRRM3A6NNA2 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.56■□□□□ 0.72
SRRM3A6NNA2 FAM21FP-204ENST00000608637 956 ntBASIC19.56■□□□□ 0.72
SRRM3A6NNA2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SRRM3A6NNA2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SRRM3A6NNA2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms