Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRAV27A0A087WT01 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV27A0A087WT01 ANO7L1-203ENST00000602586 1720 ntBASIC17.18■□□□□ 0.34
TRAV27A0A087WT01 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV27A0A087WT01 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRAV27A0A087WT01 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV27A0A087WT01 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV27A0A087WT01 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV27A0A087WT01 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV27A0A087WT01 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV27A0A087WT01 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV27A0A087WT01 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV27A0A087WT01 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 KRT8P41-201ENST00000533985 1514 ntBASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV27A0A087WT01 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV27A0A087WT01 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAV27A0A087WT01 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV27A0A087WT01 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV27A0A087WT01 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.15■□□□□ 0.34
TRAV27A0A087WT01 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV27A0A087WT01 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TRAV27A0A087WT01 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV27A0A087WT01 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV27A0A087WT01 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV27A0A087WT01 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV27A0A087WT01 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV27A0A087WT01 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
TRAV27A0A087WT01 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAV27A0A087WT01 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRAV27A0A087WT01 KRT18P6-201ENST00000555540 1265 ntBASIC17.15■□□□□ 0.34
TRAV27A0A087WT01 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.15■□□□□ 0.34
TRAV27A0A087WT01 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV27A0A087WT01 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TRAV27A0A087WT01 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TRAV27A0A087WT01 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
TRAV27A0A087WT01 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms