Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV9-1A0A075B6T8 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV9-1A0A075B6T8 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV9-1A0A075B6T8 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV9-1A0A075B6T8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV9-1A0A075B6T8 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
TRAV9-1A0A075B6T8 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV9-1A0A075B6T8 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV9-1A0A075B6T8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TRAV9-1A0A075B6T8 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV9-1A0A075B6T8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TRAV9-1A0A075B6T8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAV9-1A0A075B6T8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.21□□□□□ -0.13
TRAV9-1A0A075B6T8 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV9-1A0A075B6T8 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV9-1A0A075B6T8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV9-1A0A075B6T8 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV9-1A0A075B6T8 YBX1P1-201ENST00000445822 960 ntBASIC14.21□□□□□ -0.13
TRAV9-1A0A075B6T8 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC14.21□□□□□ -0.13
TRAV9-1A0A075B6T8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV9-1A0A075B6T8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAV9-1A0A075B6T8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV9-1A0A075B6T8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRAV9-1A0A075B6T8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV9-1A0A075B6T8 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV9-1A0A075B6T8 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV9-1A0A075B6T8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV9-1A0A075B6T8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV9-1A0A075B6T8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV9-1A0A075B6T8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV9-1A0A075B6T8 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
TRAV9-1A0A075B6T8 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV9-1A0A075B6T8 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.21□□□□□ -0.14
TRAV9-1A0A075B6T8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.21□□□□□ -0.14
TRAV9-1A0A075B6T8 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 MIR3621-201ENST00000580529 85 ntBASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 AC126544.1-201ENST00000580842 1059 ntBASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 AL355001.2-201ENST00000620617 1191 ntBASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 RASSF1-AS1-201ENST00000629828 790 ntBASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 RBM17P2-201ENST00000616397 1405 ntBASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
TRAV9-1A0A075B6T8 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV9-1A0A075B6T8 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV9-1A0A075B6T8 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV9-1A0A075B6T8 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TRAV9-1A0A075B6T8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV9-1A0A075B6T8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV9-1A0A075B6T8 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV9-1A0A075B6T8 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV9-1A0A075B6T8 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRAV9-1A0A075B6T8 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV9-1A0A075B6T8 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV9-1A0A075B6T8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV9-1A0A075B6T8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms