Protein–RNA interactions for Protein: Q9Y5I3

PCDHA1, Protocadherin alpha-1, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1Q9Y5I3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.76□□□□□ -1.97
PCDHA1Q9Y5I3 AC103810.6-201ENST00000606708 136 ntBASIC2.76□□□□□ -1.97
PCDHA1Q9Y5I3 AC011476.5-201ENST00000615594 130 ntBASIC2.76□□□□□ -1.97
PCDHA1Q9Y5I3 MIR1291-201ENST00000627649 87 ntBASIC2.76□□□□□ -1.97
PCDHA1Q9Y5I3 AC068205.3-201ENST00000636385 468 ntBASIC2.76□□□□□ -1.97
PCDHA1Q9Y5I3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.76□□□□□ -1.97
PCDHA1Q9Y5I3 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
PCDHA1Q9Y5I3 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
PCDHA1Q9Y5I3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
PCDHA1Q9Y5I3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.76□□□□□ -1.97
PCDHA1Q9Y5I3 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PCDHA1Q9Y5I3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
PCDHA1Q9Y5I3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.75□□□□□ -1.97
PCDHA1Q9Y5I3 LINC02555-201ENST00000563933 1951 ntBASIC2.75□□□□□ -1.97
PCDHA1Q9Y5I3 Y_RNA.19-201ENST00000362462 99 ntBASIC2.75□□□□□ -1.97
PCDHA1Q9Y5I3 RNU6-238P-201ENST00000363313 106 ntBASIC2.75□□□□□ -1.97
PCDHA1Q9Y5I3 RNU6-1180P-201ENST00000364935 107 ntBASIC2.75□□□□□ -1.97
PCDHA1Q9Y5I3 RNU6-234P-201ENST00000365229 104 ntBASIC2.75□□□□□ -1.97
PCDHA1Q9Y5I3 RNU6-546P-201ENST00000383991 107 ntBASIC2.75□□□□□ -1.97
PCDHA1Q9Y5I3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
PCDHA1Q9Y5I3 SNORD115-46-201ENST00000390982 71 ntBASIC2.75□□□□□ -1.97
PCDHA1Q9Y5I3 AL033519.2-201ENST00000403958 392 ntBASIC2.75□□□□□ -1.97
PCDHA1Q9Y5I3 MIR1302-3-201ENST00000408128 138 ntBASIC2.75□□□□□ -1.97
PCDHA1Q9Y5I3 RNU4-53P-201ENST00000410828 140 ntBASIC2.75□□□□□ -1.97
PCDHA1Q9Y5I3 ELOCP21-201ENST00000412558 336 ntBASIC2.75□□□□□ -1.97
PCDHA1Q9Y5I3 UBBP3-201ENST00000445497 241 ntBASIC2.75□□□□□ -1.97
PCDHA1Q9Y5I3 LINC01399-202ENST00000458450 244 ntBASIC2.75□□□□□ -1.97
PCDHA1Q9Y5I3 RNY3P15-201ENST00000516297 97 ntBASIC2.75□□□□□ -1.97
PCDHA1Q9Y5I3 RNU5F-4P-201ENST00000516581 114 ntBASIC2.75□□□□□ -1.97
PCDHA1Q9Y5I3 AC022616.8-201ENST00000533569 253 ntBASIC2.75□□□□□ -1.97
PCDHA1Q9Y5I3 MYL12BP1-201ENST00000569826 507 ntBASIC2.75□□□□□ -1.97
PCDHA1Q9Y5I3 AC016717.2-201ENST00000609089 5141 ntBASIC2.75□□□□□ -1.97
PCDHA1Q9Y5I3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
PCDHA1Q9Y5I3 MIR561-201ENST00000385216 97 ntBASIC2.74□□□□□ -1.97
PCDHA1Q9Y5I3 RNA5SP504-201ENST00000410676 117 ntBASIC2.74□□□□□ -1.97
PCDHA1Q9Y5I3 RNU2-32P-201ENST00000411193 191 ntBASIC2.74□□□□□ -1.97
PCDHA1Q9Y5I3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.74□□□□□ -1.97
PCDHA1Q9Y5I3 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.74□□□□□ -1.97
PCDHA1Q9Y5I3 UQCRBP2-201ENST00000447827 297 ntBASIC2.74□□□□□ -1.97
PCDHA1Q9Y5I3 NDUFB4P10-201ENST00000452541 359 ntBASIC2.74□□□□□ -1.97
PCDHA1Q9Y5I3 RPS27AP9-201ENST00000477681 438 ntBASIC2.74□□□□□ -1.97
PCDHA1Q9Y5I3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.74□□□□□ -1.97
PCDHA1Q9Y5I3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.74□□□□□ -1.97
PCDHA1Q9Y5I3 RNU6-408P-201ENST00000515910 100 ntBASIC2.74□□□□□ -1.97
PCDHA1Q9Y5I3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.74□□□□□ -1.97
PCDHA1Q9Y5I3 AK6P2-201ENST00000549020 471 ntBASIC2.74□□□□□ -1.97
PCDHA1Q9Y5I3 RRN3P3-201ENST00000549207 578 ntBASIC2.74□□□□□ -1.97
PCDHA1Q9Y5I3 AC018448.1-201ENST00000552843 316 ntBASIC2.74□□□□□ -1.97
PCDHA1Q9Y5I3 MIR4423-201ENST00000580922 80 ntBASIC2.74□□□□□ -1.97
PCDHA1Q9Y5I3 MIR4503-201ENST00000582187 83 ntBASIC2.74□□□□□ -1.97
PCDHA1Q9Y5I3 AL355297.2-201ENST00000604792 129 ntBASIC2.74□□□□□ -1.97
PCDHA1Q9Y5I3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.74□□□□□ -1.97
PCDHA1Q9Y5I3 MIR8062-201ENST00000621515 85 ntBASIC2.74□□□□□ -1.97
PCDHA1Q9Y5I3 AC008873.1-201ENST00000625051 138 ntBASIC2.74□□□□□ -1.97
PCDHA1Q9Y5I3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.74□□□□□ -1.97
PCDHA1Q9Y5I3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
PCDHA1Q9Y5I3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
PCDHA1Q9Y5I3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
PCDHA1Q9Y5I3 MIR410-201ENST00000362222 80 ntBASIC2.73□□□□□ -1.97
PCDHA1Q9Y5I3 Y_RNA.143-201ENST00000363520 106 ntBASIC2.73□□□□□ -1.97
PCDHA1Q9Y5I3 RNU6-961P-201ENST00000363893 105 ntBASIC2.73□□□□□ -1.97
PCDHA1Q9Y5I3 Y_RNA.230-201ENST00000364348 109 ntBASIC2.73□□□□□ -1.97
PCDHA1Q9Y5I3 SNORD114-30-201ENST00000364448 72 ntBASIC2.73□□□□□ -1.97
PCDHA1Q9Y5I3 RNU1-109P-201ENST00000383960 147 ntBASIC2.73□□□□□ -1.97
PCDHA1Q9Y5I3 Y_RNA.556-201ENST00000384677 113 ntBASIC2.73□□□□□ -1.97
PCDHA1Q9Y5I3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
PCDHA1Q9Y5I3 RN7SKP284-201ENST00000411002 343 ntBASIC2.73□□□□□ -1.97
PCDHA1Q9Y5I3 RPS12P2-201ENST00000439728 269 ntBASIC2.73□□□□□ -1.97
PCDHA1Q9Y5I3 MIR449C-201ENST00000516047 92 ntBASIC2.73□□□□□ -1.97
PCDHA1Q9Y5I3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.73□□□□□ -1.97
PCDHA1Q9Y5I3 AC136932.1-201ENST00000574771 208 ntBASIC2.73□□□□□ -1.97
PCDHA1Q9Y5I3 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.73□□□□□ -1.97
PCDHA1Q9Y5I3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PCDHA1Q9Y5I3 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
PCDHA1Q9Y5I3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PCDHA1Q9Y5I3 Y_RNA.64-201ENST00000362845 102 ntBASIC2.72□□□□□ -1.97
PCDHA1Q9Y5I3 Y_RNA.105-201ENST00000363182 111 ntBASIC2.72□□□□□ -1.97
PCDHA1Q9Y5I3 RNU6-626P-201ENST00000363354 107 ntBASIC2.72□□□□□ -1.97
PCDHA1Q9Y5I3 RNU1-23P-201ENST00000363361 144 ntBASIC2.72□□□□□ -1.97
PCDHA1Q9Y5I3 RNU6-727P-201ENST00000363592 107 ntBASIC2.72□□□□□ -1.97
PCDHA1Q9Y5I3 Y_RNA.222-201ENST00000364264 102 ntBASIC2.72□□□□□ -1.97
PCDHA1Q9Y5I3 RNA5SP125-201ENST00000364843 120 ntBASIC2.72□□□□□ -1.97
PCDHA1Q9Y5I3 RNU6-806P-201ENST00000365147 105 ntBASIC2.72□□□□□ -1.97
PCDHA1Q9Y5I3 Y_RNA.415-201ENST00000384012 112 ntBASIC2.72□□□□□ -1.97
PCDHA1Q9Y5I3 Y_RNA.452-201ENST00000384202 108 ntBASIC2.72□□□□□ -1.97
PCDHA1Q9Y5I3 SNORA70B-201ENST00000384210 135 ntBASIC2.72□□□□□ -1.97
PCDHA1Q9Y5I3 Y_RNA.498-201ENST00000384460 102 ntBASIC2.72□□□□□ -1.97
PCDHA1Q9Y5I3 MIR586-201ENST00000385035 97 ntBASIC2.72□□□□□ -1.97
PCDHA1Q9Y5I3 MIR300-201ENST00000401138 83 ntBASIC2.72□□□□□ -1.97
PCDHA1Q9Y5I3 RNU6-121P-201ENST00000410525 99 ntBASIC2.72□□□□□ -1.97
PCDHA1Q9Y5I3 RNU2-48P-201ENST00000410694 191 ntBASIC2.72□□□□□ -1.97
PCDHA1Q9Y5I3 RNU5A-5P-201ENST00000411054 116 ntBASIC2.72□□□□□ -1.97
PCDHA1Q9Y5I3 AC005002.2-201ENST00000438228 269 ntBASIC2.72□□□□□ -1.97
PCDHA1Q9Y5I3 RPL39P40-201ENST00000445481 146 ntBASIC2.72□□□□□ -1.97
PCDHA1Q9Y5I3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.72□□□□□ -1.97
PCDHA1Q9Y5I3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.72□□□□□ -1.97
PCDHA1Q9Y5I3 RNU7-14P-201ENST00000459331 62 ntBASIC2.72□□□□□ -1.97
PCDHA1Q9Y5I3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.72□□□□□ -1.97
PCDHA1Q9Y5I3 RN7SKP40-201ENST00000517211 242 ntBASIC2.72□□□□□ -1.97
PCDHA1Q9Y5I3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms