Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 RN7SKP202-201ENST00000410439 330 ntBASIC4.52□□□□□ -1.69
PCDHGA4Q9Y5G9 CRYBB2P1-203ENST00000415709 538 ntBASIC4.52□□□□□ -1.69
PCDHGA4Q9Y5G9 RPEP3-201ENST00000425462 676 ntBASIC4.52□□□□□ -1.69
PCDHGA4Q9Y5G9 RPS26P28-201ENST00000470806 348 ntBASIC4.52□□□□□ -1.69
PCDHGA4Q9Y5G9 AC109327.1-201ENST00000471666 403 ntBASIC4.52□□□□□ -1.69
PCDHGA4Q9Y5G9 SNORA70.14-201ENST00000516205 110 ntBASIC4.52□□□□□ -1.69
PCDHGA4Q9Y5G9 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.52□□□□□ -1.69
PCDHGA4Q9Y5G9 Y_RNA.773-201ENST00000607168 90 ntBASIC4.52□□□□□ -1.69
PCDHGA4Q9Y5G9 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHGA4Q9Y5G9 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDHGA4Q9Y5G9 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PCDHGA4Q9Y5G9 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDHGA4Q9Y5G9 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PCDHGA4Q9Y5G9 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.52□□□□□ -1.69
PCDHGA4Q9Y5G9 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHGA4Q9Y5G9 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHGA4Q9Y5G9 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
PCDHGA4Q9Y5G9 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.51□□□□□ -1.69
PCDHGA4Q9Y5G9 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHGA4Q9Y5G9 Y_RNA.4-201ENST00000362333 112 ntBASIC4.51□□□□□ -1.69
PCDHGA4Q9Y5G9 Y_RNA.351-201ENST00000365436 96 ntBASIC4.51□□□□□ -1.69
PCDHGA4Q9Y5G9 RNY1P4-201ENST00000384595 115 ntBASIC4.51□□□□□ -1.69
PCDHGA4Q9Y5G9 RPS26P2-201ENST00000440331 348 ntBASIC4.51□□□□□ -1.69
PCDHGA4Q9Y5G9 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC4.51□□□□□ -1.69
PCDHGA4Q9Y5G9 AC006445.1-201ENST00000491925 405 ntBASIC4.51□□□□□ -1.69
PCDHGA4Q9Y5G9 RNU7-25P-201ENST00000516544 62 ntBASIC4.51□□□□□ -1.69
PCDHGA4Q9Y5G9 RNU6-1291P-201ENST00000516591 104 ntBASIC4.51□□□□□ -1.69
PCDHGA4Q9Y5G9 MIR2114-201ENST00000516645 80 ntBASIC4.51□□□□□ -1.69
PCDHGA4Q9Y5G9 SNORD36C-201ENST00000516733 66 ntBASIC4.51□□□□□ -1.69
PCDHGA4Q9Y5G9 IGHVII-40-1-201ENST00000517316 58 ntBASIC4.51□□□□□ -1.69
PCDHGA4Q9Y5G9 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.51□□□□□ -1.69
PCDHGA4Q9Y5G9 AC105129.1-201ENST00000560250 297 ntBASIC4.51□□□□□ -1.69
PCDHGA4Q9Y5G9 AC064859.1-201ENST00000624741 174 ntBASIC4.51□□□□□ -1.69
PCDHGA4Q9Y5G9 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.51□□□□□ -1.69
PCDHGA4Q9Y5G9 AP003122.5-201ENST00000527668 3766 ntBASIC4.51□□□□□ -1.69
PCDHGA4Q9Y5G9 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHGA4Q9Y5G9 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHGA4Q9Y5G9 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHGA4Q9Y5G9 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHGA4Q9Y5G9 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PCDHGA4Q9Y5G9 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.51□□□□□ -1.69
PCDHGA4Q9Y5G9 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHGA4Q9Y5G9 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHGA4Q9Y5G9 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHGA4Q9Y5G9 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHGA4Q9Y5G9 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHGA4Q9Y5G9 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
PCDHGA4Q9Y5G9 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHGA4Q9Y5G9 SNORA31-201ENST00000362607 130 ntBASIC4.5□□□□□ -1.69
PCDHGA4Q9Y5G9 RNU1-96P-201ENST00000364163 162 ntBASIC4.5□□□□□ -1.69
PCDHGA4Q9Y5G9 SNORA57.1-201ENST00000391227 145 ntBASIC4.5□□□□□ -1.69
PCDHGA4Q9Y5G9 Y_RNA.607-201ENST00000410597 98 ntBASIC4.5□□□□□ -1.69
PCDHGA4Q9Y5G9 RPL32P35-201ENST00000415214 394 ntBASIC4.5□□□□□ -1.69
PCDHGA4Q9Y5G9 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.5□□□□□ -1.69
PCDHGA4Q9Y5G9 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.5□□□□□ -1.69
PCDHGA4Q9Y5G9 AL162591.2-201ENST00000449634 317 ntBASIC4.5□□□□□ -1.69
PCDHGA4Q9Y5G9 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.5□□□□□ -1.69
PCDHGA4Q9Y5G9 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.5□□□□□ -1.69
PCDHGA4Q9Y5G9 AC006441.5-201ENST00000612680 209 ntBASIC4.5□□□□□ -1.69
PCDHGA4Q9Y5G9 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHGA4Q9Y5G9 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.5□□□□□ -1.69
PCDHGA4Q9Y5G9 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PCDHGA4Q9Y5G9 AC018630.2-201ENST00000534866 2403 ntBASIC4.5□□□□□ -1.69
PCDHGA4Q9Y5G9 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.5□□□□□ -1.69
PCDHGA4Q9Y5G9 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHGA4Q9Y5G9 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHGA4Q9Y5G9 UBE3AP2-201ENST00000429033 2259 ntBASIC4.49□□□□□ -1.69
PCDHGA4Q9Y5G9 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHGA4Q9Y5G9 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHGA4Q9Y5G9 AC017071.1-201ENST00000564407 2204 ntBASIC4.49□□□□□ -1.69
PCDHGA4Q9Y5G9 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHGA4Q9Y5G9 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHGA4Q9Y5G9 SNORD6-201ENST00000365444 73 ntBASIC4.49□□□□□ -1.69
PCDHGA4Q9Y5G9 Y_RNA.377-201ENST00000365644 108 ntBASIC4.49□□□□□ -1.69
PCDHGA4Q9Y5G9 RNU6-198P-201ENST00000384258 104 ntBASIC4.49□□□□□ -1.69
PCDHGA4Q9Y5G9 RPS23P4-201ENST00000487908 423 ntBASIC4.49□□□□□ -1.69
PCDHGA4Q9Y5G9 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.49□□□□□ -1.69
PCDHGA4Q9Y5G9 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
PCDHGA4Q9Y5G9 AC020914.4-201ENST00000597690 277 ntBASIC4.49□□□□□ -1.69
PCDHGA4Q9Y5G9 AC091932.4-201ENST00000623386 200 ntBASIC4.49□□□□□ -1.69
PCDHGA4Q9Y5G9 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHGA4Q9Y5G9 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHGA4Q9Y5G9 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PCDHGA4Q9Y5G9 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PCDHGA4Q9Y5G9 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.49□□□□□ -1.69
PCDHGA4Q9Y5G9 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHGA4Q9Y5G9 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.48□□□□□ -1.69
PCDHGA4Q9Y5G9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHGA4Q9Y5G9 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHGA4Q9Y5G9 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
PCDHGA4Q9Y5G9 AC010300.1-201ENST00000600671 5134 ntBASIC4.48□□□□□ -1.69
PCDHGA4Q9Y5G9 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHGA4Q9Y5G9 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
PCDHGA4Q9Y5G9 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
PCDHGA4Q9Y5G9 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
PCDHGA4Q9Y5G9 RNA5SP388-201ENST00000362584 119 ntBASIC4.48□□□□□ -1.69
PCDHGA4Q9Y5G9 RNA5SP509-201ENST00000364577 119 ntBASIC4.48□□□□□ -1.69
PCDHGA4Q9Y5G9 MIR513A2-201ENST00000385249 127 ntBASIC4.48□□□□□ -1.69
PCDHGA4Q9Y5G9 AC017083.1-201ENST00000428093 483 ntBASIC4.48□□□□□ -1.69
PCDHGA4Q9Y5G9 AL445646.1-201ENST00000431784 216 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms