Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.3□□□□□ -2.04
DDX4Q9NQI0 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.3□□□□□ -2.04
DDX4Q9NQI0 SNRPGP17-201ENST00000603780 214 ntBASIC2.3□□□□□ -2.04
DDX4Q9NQI0 AC087588.2-201ENST00000617667 426 ntBASIC2.3□□□□□ -2.04
DDX4Q9NQI0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.3□□□□□ -2.04
DDX4Q9NQI0 MTND5P16-201ENST00000460269 1703 ntBASIC2.3□□□□□ -2.04
DDX4Q9NQI0 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.3□□□□□ -2.04
DDX4Q9NQI0 ZNF204P-201ENST00000416749 2397 ntBASIC2.29□□□□□ -2.04
DDX4Q9NQI0 AL596028.1-201ENST00000326971 197 ntBASIC2.29□□□□□ -2.04
DDX4Q9NQI0 MIRLET7G-201ENST00000362280 84 ntBASIC2.29□□□□□ -2.04
DDX4Q9NQI0 RNU1-23P-201ENST00000363361 144 ntBASIC2.29□□□□□ -2.04
DDX4Q9NQI0 Y_RNA.138-201ENST00000363462 102 ntBASIC2.29□□□□□ -2.04
DDX4Q9NQI0 RNU4-42P-201ENST00000364738 142 ntBASIC2.29□□□□□ -2.04
DDX4Q9NQI0 AC117470.1-201ENST00000381974 330 ntBASIC2.29□□□□□ -2.04
DDX4Q9NQI0 MIR628-201ENST00000385229 95 ntBASIC2.29□□□□□ -2.04
DDX4Q9NQI0 Y_RNA.592-201ENST00000410274 109 ntBASIC2.29□□□□□ -2.04
DDX4Q9NQI0 AC114482.1-201ENST00000418010 247 ntBASIC2.29□□□□□ -2.04
DDX4Q9NQI0 AC009238.1-201ENST00000442165 424 ntBASIC2.29□□□□□ -2.04
DDX4Q9NQI0 AC009237.6-201ENST00000446969 424 ntBASIC2.29□□□□□ -2.04
DDX4Q9NQI0 RPL23AP7-203ENST00000449021 469 ntBASIC2.29□□□□□ -2.04
DDX4Q9NQI0 RNU6-475P-201ENST00000516073 104 ntBASIC2.29□□□□□ -2.04
DDX4Q9NQI0 RNU6-988P-201ENST00000519081 107 ntBASIC2.29□□□□□ -2.04
DDX4Q9NQI0 CBX3P7-201ENST00000532876 502 ntBASIC2.29□□□□□ -2.04
DDX4Q9NQI0 GNAI2P1-201ENST00000541815 315 ntBASIC2.29□□□□□ -2.04
DDX4Q9NQI0 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.29□□□□□ -2.04
DDX4Q9NQI0 AC078899.2-201ENST00000595282 212 ntBASIC2.29□□□□□ -2.04
DDX4Q9NQI0 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.29□□□□□ -2.04
DDX4Q9NQI0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
DDX4Q9NQI0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
DDX4Q9NQI0 RNU1-76P-201ENST00000362903 159 ntBASIC2.28□□□□□ -2.04
DDX4Q9NQI0 RNU6-234P-201ENST00000365229 104 ntBASIC2.28□□□□□ -2.04
DDX4Q9NQI0 Y_RNA.358-201ENST00000365491 99 ntBASIC2.28□□□□□ -2.04
DDX4Q9NQI0 RNU6-474P-201ENST00000384243 107 ntBASIC2.28□□□□□ -2.04
DDX4Q9NQI0 Y_RNA.496-201ENST00000384444 101 ntBASIC2.28□□□□□ -2.04
DDX4Q9NQI0 MIR10B-201ENST00000385011 110 ntBASIC2.28□□□□□ -2.04
DDX4Q9NQI0 MIR9-3-201ENST00000385084 90 ntBASIC2.28□□□□□ -2.04
DDX4Q9NQI0 RNU2-20P-201ENST00000410425 191 ntBASIC2.28□□□□□ -2.04
DDX4Q9NQI0 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.28□□□□□ -2.04
DDX4Q9NQI0 AL445685.2-201ENST00000422551 342 ntBASIC2.28□□□□□ -2.04
DDX4Q9NQI0 MTCYBP6-201ENST00000441810 138 ntBASIC2.28□□□□□ -2.04
DDX4Q9NQI0 IPO7P1-201ENST00000442031 636 ntBASIC2.28□□□□□ -2.04
DDX4Q9NQI0 AL021397.1-201ENST00000451806 248 ntBASIC2.28□□□□□ -2.04
DDX4Q9NQI0 RPS29P11-201ENST00000496507 171 ntBASIC2.28□□□□□ -2.04
DDX4Q9NQI0 RN7SKP295-201ENST00000517264 153 ntBASIC2.28□□□□□ -2.04
DDX4Q9NQI0 PRELID2P1-201ENST00000552837 301 ntBASIC2.28□□□□□ -2.04
DDX4Q9NQI0 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.28□□□□□ -2.04
DDX4Q9NQI0 VN1R91P-201ENST00000594377 169 ntBASIC2.28□□□□□ -2.04
DDX4Q9NQI0 AC092447.9-201ENST00000603395 144 ntBASIC2.28□□□□□ -2.04
DDX4Q9NQI0 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.28□□□□□ -2.04
DDX4Q9NQI0 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
DDX4Q9NQI0 AC005336.3-201ENST00000623833 2679 ntBASIC2.27□□□□□ -2.05
DDX4Q9NQI0 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
DDX4Q9NQI0 RNU6-222P-201ENST00000362438 107 ntBASIC2.27□□□□□ -2.05
DDX4Q9NQI0 Y_RNA.28-201ENST00000362554 111 ntBASIC2.27□□□□□ -2.05
DDX4Q9NQI0 RNU6-873P-201ENST00000363833 107 ntBASIC2.27□□□□□ -2.05
DDX4Q9NQI0 RNU6-611P-201ENST00000384276 104 ntBASIC2.27□□□□□ -2.05
DDX4Q9NQI0 RNY1P14-201ENST00000384426 108 ntBASIC2.27□□□□□ -2.05
DDX4Q9NQI0 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
DDX4Q9NQI0 SNORA17.3-201ENST00000391159 129 ntBASIC2.27□□□□□ -2.05
DDX4Q9NQI0 AL357139.1-201ENST00000407792 426 ntBASIC2.27□□□□□ -2.05
DDX4Q9NQI0 U3.40-201ENST00000408706 208 ntBASIC2.27□□□□□ -2.05
DDX4Q9NQI0 MTCO3P19-201ENST00000415864 321 ntBASIC2.27□□□□□ -2.05
DDX4Q9NQI0 MCFD2P1-201ENST00000417812 300 ntBASIC2.27□□□□□ -2.05
DDX4Q9NQI0 EIF1P2-201ENST00000428233 350 ntBASIC2.27□□□□□ -2.05
DDX4Q9NQI0 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.27□□□□□ -2.05
DDX4Q9NQI0 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.27□□□□□ -2.05
DDX4Q9NQI0 AC009237.7-201ENST00000447357 229 ntBASIC2.27□□□□□ -2.05
DDX4Q9NQI0 RPS23P5-201ENST00000495419 428 ntBASIC2.27□□□□□ -2.05
DDX4Q9NQI0 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.27□□□□□ -2.05
DDX4Q9NQI0 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.27□□□□□ -2.05
DDX4Q9NQI0 SNORA25.14-201ENST00000516481 132 ntBASIC2.27□□□□□ -2.05
DDX4Q9NQI0 RNU5F-4P-201ENST00000516581 114 ntBASIC2.27□□□□□ -2.05
DDX4Q9NQI0 Y_RNA.711-201ENST00000516993 102 ntBASIC2.27□□□□□ -2.05
DDX4Q9NQI0 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
DDX4Q9NQI0 AC020661.2-201ENST00000560114 134 ntBASIC2.27□□□□□ -2.05
DDX4Q9NQI0 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.27□□□□□ -2.05
DDX4Q9NQI0 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.27□□□□□ -2.05
DDX4Q9NQI0 MIR4287-201ENST00000579398 78 ntBASIC2.27□□□□□ -2.05
DDX4Q9NQI0 MIR5006-201ENST00000583027 110 ntBASIC2.27□□□□□ -2.05
DDX4Q9NQI0 AL356055.1-201ENST00000602528 446 ntBASIC2.27□□□□□ -2.05
DDX4Q9NQI0 AC006157.1-201ENST00000611750 366 ntBASIC2.27□□□□□ -2.05
DDX4Q9NQI0 AC083806.3-201ENST00000614016 455 ntBASIC2.27□□□□□ -2.05
DDX4Q9NQI0 U2.1-201ENST00000618978 145 ntBASIC2.27□□□□□ -2.05
DDX4Q9NQI0 AL606534.2-204ENST00000635008 178 ntBASIC2.27□□□□□ -2.05
DDX4Q9NQI0 MIR4272-201ENST00000635924 64 ntBASIC2.27□□□□□ -2.05
DDX4Q9NQI0 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
DDX4Q9NQI0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.27□□□□□ -2.05
DDX4Q9NQI0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
DDX4Q9NQI0 RNU1-62P-201ENST00000362599 164 ntBASIC2.26□□□□□ -2.05
DDX4Q9NQI0 SNORA25B-201ENST00000365507 128 ntBASIC2.26□□□□□ -2.05
DDX4Q9NQI0 SNORA18.2-201ENST00000383865 132 ntBASIC2.26□□□□□ -2.05
DDX4Q9NQI0 Y_RNA.557-201ENST00000384680 107 ntBASIC2.26□□□□□ -2.05
DDX4Q9NQI0 MIR487A-201ENST00000385009 80 ntBASIC2.26□□□□□ -2.05
DDX4Q9NQI0 PMCHL1-202ENST00000423102 261 ntBASIC2.26□□□□□ -2.05
DDX4Q9NQI0 WARS2P1-201ENST00000429678 537 ntBASIC2.26□□□□□ -2.05
DDX4Q9NQI0 AC004386.2-201ENST00000441858 148 ntBASIC2.26□□□□□ -2.05
DDX4Q9NQI0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.26□□□□□ -2.05
DDX4Q9NQI0 SNORA25.10-201ENST00000515926 124 ntBASIC2.26□□□□□ -2.05
DDX4Q9NQI0 SNORA40.14-201ENST00000516543 86 ntBASIC2.26□□□□□ -2.05
DDX4Q9NQI0 RNU6-344P-201ENST00000516635 111 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms