Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 RNU7-26P-201ENST00000458980 63 ntBASIC3.18□□□□□ -1.9
TRIM55Q9BYV6 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.18□□□□□ -1.9
TRIM55Q9BYV6 MTND1P19-201ENST00000511780 315 ntBASIC3.18□□□□□ -1.9
TRIM55Q9BYV6 SERF1AP1-201ENST00000514575 187 ntBASIC3.18□□□□□ -1.9
TRIM55Q9BYV6 RN7SKP43-201ENST00000516173 320 ntBASIC3.18□□□□□ -1.9
TRIM55Q9BYV6 RNU2-31P-201ENST00000516954 155 ntBASIC3.18□□□□□ -1.9
TRIM55Q9BYV6 MIR4325-201ENST00000583049 90 ntBASIC3.18□□□□□ -1.9
TRIM55Q9BYV6 MIR4298-201ENST00000584380 73 ntBASIC3.18□□□□□ -1.9
TRIM55Q9BYV6 MIR4276-201ENST00000584832 70 ntBASIC3.18□□□□□ -1.9
TRIM55Q9BYV6 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.18□□□□□ -1.9
TRIM55Q9BYV6 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
TRIM55Q9BYV6 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TRIM55Q9BYV6 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
TRIM55Q9BYV6 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.18□□□□□ -1.9
TRIM55Q9BYV6 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.17□□□□□ -1.9
TRIM55Q9BYV6 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.17□□□□□ -1.9
TRIM55Q9BYV6 RNU6-326P-201ENST00000365480 107 ntBASIC3.17□□□□□ -1.9
TRIM55Q9BYV6 RNU6-418P-201ENST00000384035 107 ntBASIC3.17□□□□□ -1.9
TRIM55Q9BYV6 Y_RNA.477-201ENST00000384352 108 ntBASIC3.17□□□□□ -1.9
TRIM55Q9BYV6 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.17□□□□□ -1.9
TRIM55Q9BYV6 AC108059.2-201ENST00000434626 151 ntBASIC3.17□□□□□ -1.9
TRIM55Q9BYV6 AC010531.2-201ENST00000465012 153 ntBASIC3.17□□□□□ -1.9
TRIM55Q9BYV6 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.17□□□□□ -1.9
TRIM55Q9BYV6 MIR3128-201ENST00000581957 66 ntBASIC3.17□□□□□ -1.9
TRIM55Q9BYV6 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.17□□□□□ -1.9
TRIM55Q9BYV6 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM55Q9BYV6 AC108206.1-201ENST00000570186 4159 ntBASIC3.16□□□□□ -1.9
TRIM55Q9BYV6 Y_RNA.418-201ENST00000384029 102 ntBASIC3.16□□□□□ -1.9
TRIM55Q9BYV6 Y_RNA.476-201ENST00000384347 108 ntBASIC3.16□□□□□ -1.9
TRIM55Q9BYV6 SNORD14D-201ENST00000384390 87 ntBASIC3.16□□□□□ -1.9
TRIM55Q9BYV6 RNU6-1235P-201ENST00000384559 107 ntBASIC3.16□□□□□ -1.9
TRIM55Q9BYV6 RNU6-57P-201ENST00000411348 103 ntBASIC3.16□□□□□ -1.9
TRIM55Q9BYV6 AC123900.1-201ENST00000420390 96 ntBASIC3.16□□□□□ -1.9
TRIM55Q9BYV6 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.16□□□□□ -1.9
TRIM55Q9BYV6 AL139281.1-201ENST00000422120 335 ntBASIC3.16□□□□□ -1.9
TRIM55Q9BYV6 PRELID3BP1-201ENST00000457142 540 ntBASIC3.16□□□□□ -1.9
TRIM55Q9BYV6 RNU6-498P-201ENST00000459468 107 ntBASIC3.16□□□□□ -1.9
TRIM55Q9BYV6 RNU6-221P-201ENST00000459541 99 ntBASIC3.16□□□□□ -1.9
TRIM55Q9BYV6 RNU6-948P-201ENST00000516374 107 ntBASIC3.16□□□□□ -1.9
TRIM55Q9BYV6 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM55Q9BYV6 NDUFA5P6-201ENST00000542110 379 ntBASIC3.16□□□□□ -1.9
TRIM55Q9BYV6 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
TRIM55Q9BYV6 MIR3668-201ENST00000582138 75 ntBASIC3.16□□□□□ -1.9
TRIM55Q9BYV6 AC037487.3-201ENST00000606668 112 ntBASIC3.16□□□□□ -1.9
TRIM55Q9BYV6 AC090115.4-201ENST00000609970 188 ntBASIC3.16□□□□□ -1.9
TRIM55Q9BYV6 MIR6852-201ENST00000621699 66 ntBASIC3.16□□□□□ -1.9
TRIM55Q9BYV6 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM55Q9BYV6 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.16□□□□□ -1.9
TRIM55Q9BYV6 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM55Q9BYV6 Y_RNA.60-201ENST00000362831 98 ntBASIC3.15□□□□□ -1.91
TRIM55Q9BYV6 SNORD115-30-201ENST00000364117 82 ntBASIC3.15□□□□□ -1.91
TRIM55Q9BYV6 Y_RNA.489-201ENST00000384410 101 ntBASIC3.15□□□□□ -1.91
TRIM55Q9BYV6 RNU6-1072P-201ENST00000384703 107 ntBASIC3.15□□□□□ -1.91
TRIM55Q9BYV6 RNU6-443P-201ENST00000384780 107 ntBASIC3.15□□□□□ -1.91
TRIM55Q9BYV6 RNU6-907P-201ENST00000390924 102 ntBASIC3.15□□□□□ -1.91
TRIM55Q9BYV6 U3.40-201ENST00000408706 208 ntBASIC3.15□□□□□ -1.91
TRIM55Q9BYV6 MIR548H3-201ENST00000408771 118 ntBASIC3.15□□□□□ -1.91
TRIM55Q9BYV6 AC006028.1-201ENST00000438379 402 ntBASIC3.15□□□□□ -1.91
TRIM55Q9BYV6 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
TRIM55Q9BYV6 MTND4LP30-201ENST00000454092 297 ntBASIC3.15□□□□□ -1.91
TRIM55Q9BYV6 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.15□□□□□ -1.91
TRIM55Q9BYV6 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM55Q9BYV6 RNU2-34P-201ENST00000516534 121 ntBASIC3.15□□□□□ -1.91
TRIM55Q9BYV6 EIF4BP1-201ENST00000554881 351 ntBASIC3.15□□□□□ -1.91
TRIM55Q9BYV6 MIR5004-201ENST00000579078 107 ntBASIC3.15□□□□□ -1.91
TRIM55Q9BYV6 U6.115-201ENST00000636045 103 ntBASIC3.15□□□□□ -1.91
TRIM55Q9BYV6 AC009487.4-201ENST00000624969 3585 ntBASIC3.15□□□□□ -1.91
TRIM55Q9BYV6 AL365361.1-201ENST00000566942 3481 ntBASIC3.15□□□□□ -1.91
TRIM55Q9BYV6 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRIM55Q9BYV6 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
TRIM55Q9BYV6 Y_RNA.136-201ENST00000363444 102 ntBASIC3.14□□□□□ -1.91
TRIM55Q9BYV6 RNU6-379P-201ENST00000363813 104 ntBASIC3.14□□□□□ -1.91
TRIM55Q9BYV6 Y_RNA.243-201ENST00000364481 109 ntBASIC3.14□□□□□ -1.91
TRIM55Q9BYV6 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.14□□□□□ -1.91
TRIM55Q9BYV6 MTCO1P44-201ENST00000441935 243 ntBASIC3.14□□□□□ -1.91
TRIM55Q9BYV6 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.14□□□□□ -1.91
TRIM55Q9BYV6 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.14□□□□□ -1.91
TRIM55Q9BYV6 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM55Q9BYV6 SNORA4.4-201ENST00000515921 135 ntBASIC3.14□□□□□ -1.91
TRIM55Q9BYV6 RNU6-436P-201ENST00000516171 114 ntBASIC3.14□□□□□ -1.91
TRIM55Q9BYV6 RNA5SP341-201ENST00000516261 117 ntBASIC3.14□□□□□ -1.91
TRIM55Q9BYV6 MIR3145-201ENST00000580727 82 ntBASIC3.14□□□□□ -1.91
TRIM55Q9BYV6 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM55Q9BYV6 AC010900.2-201ENST00000604508 210 ntBASIC3.14□□□□□ -1.91
TRIM55Q9BYV6 AC013412.1-201ENST00000610687 192 ntBASIC3.14□□□□□ -1.91
TRIM55Q9BYV6 AL162274.2-201ENST00000614406 332 ntBASIC3.14□□□□□ -1.91
TRIM55Q9BYV6 U2.14-201ENST00000615943 113 ntBASIC3.14□□□□□ -1.91
TRIM55Q9BYV6 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM55Q9BYV6 SNORA25.1-201ENST00000362326 128 ntBASIC3.13□□□□□ -1.91
TRIM55Q9BYV6 RNU6-324P-201ENST00000363957 106 ntBASIC3.13□□□□□ -1.91
TRIM55Q9BYV6 Y_RNA.352-201ENST00000365439 102 ntBASIC3.13□□□□□ -1.91
TRIM55Q9BYV6 AL031003.1-201ENST00000404229 172 ntBASIC3.13□□□□□ -1.91
TRIM55Q9BYV6 SRIP3-201ENST00000413200 219 ntBASIC3.13□□□□□ -1.91
TRIM55Q9BYV6 MTCO1P5-201ENST00000433573 344 ntBASIC3.13□□□□□ -1.91
TRIM55Q9BYV6 RNU6-1023P-201ENST00000516137 106 ntBASIC3.13□□□□□ -1.91
TRIM55Q9BYV6 Y_RNA.673-201ENST00000516306 88 ntBASIC3.13□□□□□ -1.91
TRIM55Q9BYV6 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.13□□□□□ -1.91
TRIM55Q9BYV6 DEFB117-201ENST00000602356 141 ntBASIC3.13□□□□□ -1.91
TRIM55Q9BYV6 AC006386.2-201ENST00000624491 75 ntBASIC3.13□□□□□ -1.91
TRIM55Q9BYV6 AC012005.1-201ENST00000624575 75 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms