Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 AL365265.1-201ENST00000621045 234 ntBASIC3.19□□□□□ -1.9
E4F1Q66K89 AC008873.1-201ENST00000625051 138 ntBASIC3.19□□□□□ -1.9
E4F1Q66K89 MAPK10-322ENST00000641485 4530 ntBASIC3.19□□□□□ -1.9
E4F1Q66K89 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
E4F1Q66K89 AC000403.1-201ENST00000613696 3585 ntBASIC3.19□□□□□ -1.9
E4F1Q66K89 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.19□□□□□ -1.9
E4F1Q66K89 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.19□□□□□ -1.9
E4F1Q66K89 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
E4F1Q66K89 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
E4F1Q66K89 MIR22-201ENST00000362190 85 ntBASIC3.18□□□□□ -1.9
E4F1Q66K89 RNVU1-14-201ENST00000384770 164 ntBASIC3.18□□□□□ -1.9
E4F1Q66K89 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.18□□□□□ -1.9
E4F1Q66K89 RN7SKP51-201ENST00000410781 304 ntBASIC3.18□□□□□ -1.9
E4F1Q66K89 RNU4-47P-201ENST00000410876 114 ntBASIC3.18□□□□□ -1.9
E4F1Q66K89 TRIAP1P1-201ENST00000427062 225 ntBASIC3.18□□□□□ -1.9
E4F1Q66K89 RPL27AP5-201ENST00000469428 449 ntBASIC3.18□□□□□ -1.9
E4F1Q66K89 AC008885.1-201ENST00000514930 301 ntBASIC3.18□□□□□ -1.9
E4F1Q66K89 MIR3199-1-201ENST00000582434 88 ntBASIC3.18□□□□□ -1.9
E4F1Q66K89 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.18□□□□□ -1.9
E4F1Q66K89 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.18□□□□□ -1.9
E4F1Q66K89 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
E4F1Q66K89 Y_RNA.233-201ENST00000364407 101 ntBASIC3.17□□□□□ -1.9
E4F1Q66K89 MIR586-201ENST00000385035 97 ntBASIC3.17□□□□□ -1.9
E4F1Q66K89 RNU6-918P-201ENST00000391219 106 ntBASIC3.17□□□□□ -1.9
E4F1Q66K89 AL031121.1-201ENST00000406553 254 ntBASIC3.17□□□□□ -1.9
E4F1Q66K89 RNA5SP120-201ENST00000410900 112 ntBASIC3.17□□□□□ -1.9
E4F1Q66K89 RNU6-1328P-201ENST00000410938 106 ntBASIC3.17□□□□□ -1.9
E4F1Q66K89 OOSP1P1-201ENST00000423265 274 ntBASIC3.17□□□□□ -1.9
E4F1Q66K89 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.17□□□□□ -1.9
E4F1Q66K89 RPL30P4-201ENST00000429309 333 ntBASIC3.17□□□□□ -1.9
E4F1Q66K89 HMGB3P3-201ENST00000510526 400 ntBASIC3.17□□□□□ -1.9
E4F1Q66K89 Y_RNA.662-201ENST00000516028 97 ntBASIC3.17□□□□□ -1.9
E4F1Q66K89 RNU6-586P-201ENST00000517265 104 ntBASIC3.17□□□□□ -1.9
E4F1Q66K89 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.17□□□□□ -1.9
E4F1Q66K89 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
E4F1Q66K89 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
E4F1Q66K89 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.16□□□□□ -1.9
E4F1Q66K89 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
E4F1Q66K89 SNORA63.1-201ENST00000362493 131 ntBASIC3.16□□□□□ -1.9
E4F1Q66K89 Y_RNA.304-201ENST00000365011 112 ntBASIC3.16□□□□□ -1.9
E4F1Q66K89 Y_RNA.464-201ENST00000384282 110 ntBASIC3.16□□□□□ -1.9
E4F1Q66K89 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
E4F1Q66K89 MIR887-201ENST00000401258 79 ntBASIC3.16□□□□□ -1.9
E4F1Q66K89 RN7SKP220-201ENST00000410611 288 ntBASIC3.16□□□□□ -1.9
E4F1Q66K89 HMGN2P9-201ENST00000476875 229 ntBASIC3.16□□□□□ -1.9
E4F1Q66K89 AC083906.5-201ENST00000503722 328 ntBASIC3.16□□□□□ -1.9
E4F1Q66K89 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
E4F1Q66K89 MIR5004-201ENST00000579078 107 ntBASIC3.16□□□□□ -1.9
E4F1Q66K89 MIR4308-201ENST00000580634 81 ntBASIC3.16□□□□□ -1.9
E4F1Q66K89 MIR4444-1-201ENST00000581696 74 ntBASIC3.16□□□□□ -1.9
E4F1Q66K89 MIR4444-2-201ENST00000584390 74 ntBASIC3.16□□□□□ -1.9
E4F1Q66K89 AL133393.1-201ENST00000603277 287 ntBASIC3.16□□□□□ -1.9
E4F1Q66K89 AL713866.2-201ENST00000603579 219 ntBASIC3.16□□□□□ -1.9
E4F1Q66K89 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.16□□□□□ -1.9
E4F1Q66K89 AC019176.2-201ENST00000611579 315 ntBASIC3.16□□□□□ -1.9
E4F1Q66K89 U6.115-201ENST00000636045 103 ntBASIC3.16□□□□□ -1.9
E4F1Q66K89 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
E4F1Q66K89 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.15□□□□□ -1.9
E4F1Q66K89 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
E4F1Q66K89 RNU1-72P-201ENST00000362976 153 ntBASIC3.15□□□□□ -1.91
E4F1Q66K89 Y_RNA.243-201ENST00000364481 109 ntBASIC3.15□□□□□ -1.91
E4F1Q66K89 U8.9-201ENST00000365667 134 ntBASIC3.15□□□□□ -1.91
E4F1Q66K89 RNU6-763P-201ENST00000390865 106 ntBASIC3.15□□□□□ -1.91
E4F1Q66K89 SNORA26.7-201ENST00000391288 122 ntBASIC3.15□□□□□ -1.91
E4F1Q66K89 RPS29P12-201ENST00000460178 152 ntBASIC3.15□□□□□ -1.91
E4F1Q66K89 AC107016.2-201ENST00000547968 190 ntBASIC3.15□□□□□ -1.91
E4F1Q66K89 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.15□□□□□ -1.91
E4F1Q66K89 MIR4753-201ENST00000585119 83 ntBASIC3.15□□□□□ -1.91
E4F1Q66K89 AC091953.5-201ENST00000622919 233 ntBASIC3.15□□□□□ -1.91
E4F1Q66K89 AC034229.5-201ENST00000624258 185 ntBASIC3.15□□□□□ -1.91
E4F1Q66K89 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
E4F1Q66K89 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
E4F1Q66K89 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.14□□□□□ -1.91
E4F1Q66K89 AC110774.1-201ENST00000623567 2018 ntBASIC3.14□□□□□ -1.91
E4F1Q66K89 RNU6-234P-201ENST00000365229 104 ntBASIC3.14□□□□□ -1.91
E4F1Q66K89 RNU6-855P-201ENST00000410395 104 ntBASIC3.14□□□□□ -1.91
E4F1Q66K89 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.14□□□□□ -1.91
E4F1Q66K89 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.14□□□□□ -1.91
E4F1Q66K89 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.14□□□□□ -1.91
E4F1Q66K89 U8.19-201ENST00000459095 133 ntBASIC3.14□□□□□ -1.91
E4F1Q66K89 Y_RNA.637-201ENST00000459424 114 ntBASIC3.14□□□□□ -1.91
E4F1Q66K89 AC090515.1-201ENST00000465295 476 ntBASIC3.14□□□□□ -1.91
E4F1Q66K89 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.14□□□□□ -1.91
E4F1Q66K89 RNU6-965P-201ENST00000516721 96 ntBASIC3.14□□□□□ -1.91
E4F1Q66K89 SCARNA3-201ENST00000517097 143 ntBASIC3.14□□□□□ -1.91
E4F1Q66K89 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.14□□□□□ -1.91
E4F1Q66K89 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.14□□□□□ -1.91
E4F1Q66K89 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.14□□□□□ -1.91
E4F1Q66K89 AL161431.1-201ENST00000618966 4205 ntBASIC3.14□□□□□ -1.91
E4F1Q66K89 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.14□□□□□ -1.91
E4F1Q66K89 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.14□□□□□ -1.91
E4F1Q66K89 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
E4F1Q66K89 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
E4F1Q66K89 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
E4F1Q66K89 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
E4F1Q66K89 RNU6-653P-201ENST00000363074 106 ntBASIC3.13□□□□□ -1.91
E4F1Q66K89 SNORA40.19-201ENST00000390846 128 ntBASIC3.13□□□□□ -1.91
E4F1Q66K89 AL357139.1-201ENST00000407792 426 ntBASIC3.13□□□□□ -1.91
E4F1Q66K89 MIR1283-1-201ENST00000408494 87 ntBASIC3.13□□□□□ -1.91
E4F1Q66K89 RNU6-710P-201ENST00000410424 105 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms