Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC011266.1-201ENST00000624119 3569 ntBASIC3.74□□□□□ -1.81
RNFT1Q5M7Z0 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
RNFT1Q5M7Z0 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.74□□□□□ -1.81
RNFT1Q5M7Z0 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
RNFT1Q5M7Z0 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.73□□□□□ -1.81
RNFT1Q5M7Z0 SNORD14D-201ENST00000384390 87 ntBASIC3.73□□□□□ -1.81
RNFT1Q5M7Z0 RNU6-750P-201ENST00000390946 107 ntBASIC3.73□□□□□ -1.81
RNFT1Q5M7Z0 HDGFP1-201ENST00000405943 252 ntBASIC3.73□□□□□ -1.81
RNFT1Q5M7Z0 MIR1179-201ENST00000408703 91 ntBASIC3.73□□□□□ -1.81
RNFT1Q5M7Z0 RN7SKP202-201ENST00000410439 330 ntBASIC3.73□□□□□ -1.81
RNFT1Q5M7Z0 HSPE1P12-201ENST00000412576 301 ntBASIC3.73□□□□□ -1.81
RNFT1Q5M7Z0 MRPS17P9-201ENST00000511924 393 ntBASIC3.73□□□□□ -1.81
RNFT1Q5M7Z0 SNORA67.7-201ENST00000516664 135 ntBASIC3.73□□□□□ -1.81
RNFT1Q5M7Z0 RN7SKP282-201ENST00000516824 299 ntBASIC3.73□□□□□ -1.81
RNFT1Q5M7Z0 RNU1-45P-201ENST00000517191 141 ntBASIC3.73□□□□□ -1.81
RNFT1Q5M7Z0 SUMO2P16-201ENST00000519475 264 ntBASIC3.73□□□□□ -1.81
RNFT1Q5M7Z0 AC109329.2-201ENST00000519658 482 ntBASIC3.73□□□□□ -1.81
RNFT1Q5M7Z0 AC011604.1-201ENST00000545978 196 ntBASIC3.73□□□□□ -1.81
RNFT1Q5M7Z0 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.73□□□□□ -1.81
RNFT1Q5M7Z0 MIR4429-201ENST00000580105 73 ntBASIC3.73□□□□□ -1.81
RNFT1Q5M7Z0 AL606490.9-201ENST00000603331 271 ntBASIC3.73□□□□□ -1.81
RNFT1Q5M7Z0 AC091152.3-201ENST00000604227 325 ntBASIC3.73□□□□□ -1.81
RNFT1Q5M7Z0 AL138721.1-201ENST00000616756 179 ntBASIC3.73□□□□□ -1.81
RNFT1Q5M7Z0 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RNFT1Q5M7Z0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
RNFT1Q5M7Z0 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.73□□□□□ -1.81
RNFT1Q5M7Z0 AC009487.4-201ENST00000624969 3585 ntBASIC3.73□□□□□ -1.81
RNFT1Q5M7Z0 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
RNFT1Q5M7Z0 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RNFT1Q5M7Z0 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RNFT1Q5M7Z0 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
RNFT1Q5M7Z0 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.72□□□□□ -1.81
RNFT1Q5M7Z0 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
RNFT1Q5M7Z0 RNU6-349P-201ENST00000362402 107 ntBASIC3.72□□□□□ -1.81
RNFT1Q5M7Z0 SNORA33-201ENST00000363664 130 ntBASIC3.72□□□□□ -1.81
RNFT1Q5M7Z0 RNU6-944P-201ENST00000364023 107 ntBASIC3.72□□□□□ -1.81
RNFT1Q5M7Z0 Y_RNA.426-201ENST00000384068 113 ntBASIC3.72□□□□□ -1.81
RNFT1Q5M7Z0 RNY1P6-201ENST00000384193 109 ntBASIC3.72□□□□□ -1.81
RNFT1Q5M7Z0 SNORA12-201ENST00000391162 147 ntBASIC3.72□□□□□ -1.81
RNFT1Q5M7Z0 CRYBB2P1-203ENST00000415709 538 ntBASIC3.72□□□□□ -1.81
RNFT1Q5M7Z0 AL441985.1-201ENST00000457727 251 ntBASIC3.72□□□□□ -1.81
RNFT1Q5M7Z0 RNU5F-4P-201ENST00000516581 114 ntBASIC3.72□□□□□ -1.81
RNFT1Q5M7Z0 RNU6-1098P-201ENST00000516772 96 ntBASIC3.72□□□□□ -1.81
RNFT1Q5M7Z0 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.72□□□□□ -1.81
RNFT1Q5M7Z0 AC011602.1-201ENST00000546484 331 ntBASIC3.72□□□□□ -1.81
RNFT1Q5M7Z0 MIR3158-1-201ENST00000583596 81 ntBASIC3.72□□□□□ -1.81
RNFT1Q5M7Z0 MIR6500-201ENST00000622700 86 ntBASIC3.72□□□□□ -1.81
RNFT1Q5M7Z0 AC034229.5-201ENST00000624258 185 ntBASIC3.72□□□□□ -1.81
RNFT1Q5M7Z0 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
RNFT1Q5M7Z0 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RNFT1Q5M7Z0 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
RNFT1Q5M7Z0 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.72□□□□□ -1.81
RNFT1Q5M7Z0 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
RNFT1Q5M7Z0 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
RNFT1Q5M7Z0 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
RNFT1Q5M7Z0 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
RNFT1Q5M7Z0 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.71□□□□□ -1.82
RNFT1Q5M7Z0 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
RNFT1Q5M7Z0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RNFT1Q5M7Z0 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
RNFT1Q5M7Z0 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.71□□□□□ -1.82
RNFT1Q5M7Z0 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RNFT1Q5M7Z0 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RNFT1Q5M7Z0 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RNFT1Q5M7Z0 Y_RNA.96-201ENST00000363092 109 ntBASIC3.71□□□□□ -1.82
RNFT1Q5M7Z0 SNORD32B-201ENST00000364460 84 ntBASIC3.71□□□□□ -1.82
RNFT1Q5M7Z0 MIR548A2-201ENST00000384956 97 ntBASIC3.71□□□□□ -1.82
RNFT1Q5M7Z0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
RNFT1Q5M7Z0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.71□□□□□ -1.82
RNFT1Q5M7Z0 SNRPGP3-201ENST00000469405 227 ntBASIC3.71□□□□□ -1.82
RNFT1Q5M7Z0 NDUFA4P2-201ENST00000489989 244 ntBASIC3.71□□□□□ -1.82
RNFT1Q5M7Z0 AC025445.1-201ENST00000502728 300 ntBASIC3.71□□□□□ -1.82
RNFT1Q5M7Z0 RNU6-162P-201ENST00000516228 103 ntBASIC3.71□□□□□ -1.82
RNFT1Q5M7Z0 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.71□□□□□ -1.82
RNFT1Q5M7Z0 MIR4753-201ENST00000585119 83 ntBASIC3.71□□□□□ -1.82
RNFT1Q5M7Z0 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
RNFT1Q5M7Z0 AC010680.1-201ENST00000590024 3590 ntBASIC3.71□□□□□ -1.82
RNFT1Q5M7Z0 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
RNFT1Q5M7Z0 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RNFT1Q5M7Z0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RNFT1Q5M7Z0 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
RNFT1Q5M7Z0 RNU6-170P-201ENST00000362832 104 ntBASIC3.7□□□□□ -1.82
RNFT1Q5M7Z0 RNU6-219P-201ENST00000364728 107 ntBASIC3.7□□□□□ -1.82
RNFT1Q5M7Z0 SNORD6-201ENST00000365444 73 ntBASIC3.7□□□□□ -1.82
RNFT1Q5M7Z0 RNU6-975P-201ENST00000384296 105 ntBASIC3.7□□□□□ -1.82
RNFT1Q5M7Z0 RNU6-1104P-201ENST00000384723 104 ntBASIC3.7□□□□□ -1.82
RNFT1Q5M7Z0 MIR554-201ENST00000384874 96 ntBASIC3.7□□□□□ -1.82
RNFT1Q5M7Z0 MIR1183-201ENST00000408856 89 ntBASIC3.7□□□□□ -1.82
RNFT1Q5M7Z0 RPL30P4-201ENST00000429309 333 ntBASIC3.7□□□□□ -1.82
RNFT1Q5M7Z0 AC091153.1-201ENST00000466297 402 ntBASIC3.7□□□□□ -1.82
RNFT1Q5M7Z0 RNU6-693P-201ENST00000516134 107 ntBASIC3.7□□□□□ -1.82
RNFT1Q5M7Z0 RNA5SP468-201ENST00000516782 93 ntBASIC3.7□□□□□ -1.82
RNFT1Q5M7Z0 AC069240.1-201ENST00000548774 375 ntBASIC3.7□□□□□ -1.82
RNFT1Q5M7Z0 MIR4694-201ENST00000578534 80 ntBASIC3.7□□□□□ -1.82
RNFT1Q5M7Z0 MIR5684-201ENST00000585074 65 ntBASIC3.7□□□□□ -1.82
RNFT1Q5M7Z0 MIR92B-201ENST00000607575 96 ntBASIC3.7□□□□□ -1.82
RNFT1Q5M7Z0 MIR6868-201ENST00000611215 58 ntBASIC3.7□□□□□ -1.82
RNFT1Q5M7Z0 AC012531.4-201ENST00000616509 177 ntBASIC3.7□□□□□ -1.82
RNFT1Q5M7Z0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
RNFT1Q5M7Z0 MIR376A2-201ENST00000636782 80 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms