Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
LONRF3Q496Y0 ZNF204P-201ENST00000416749 2397 ntBASIC2.85□□□□□ -1.95
LONRF3Q496Y0 RNU6-873P-201ENST00000363833 107 ntBASIC2.85□□□□□ -1.95
LONRF3Q496Y0 Y_RNA.276-201ENST00000364732 109 ntBASIC2.85□□□□□ -1.95
LONRF3Q496Y0 DEFA7P-201ENST00000382676 285 ntBASIC2.85□□□□□ -1.95
LONRF3Q496Y0 SNORA12-201ENST00000391162 147 ntBASIC2.85□□□□□ -1.95
LONRF3Q496Y0 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.85□□□□□ -1.95
LONRF3Q496Y0 DYNLT3P2-201ENST00000442517 295 ntBASIC2.85□□□□□ -1.95
LONRF3Q496Y0 AL513328.1-201ENST00000446460 224 ntBASIC2.85□□□□□ -1.95
LONRF3Q496Y0 TRBV12-1-201ENST00000479785 344 ntBASIC2.85□□□□□ -1.95
LONRF3Q496Y0 AC067942.3-201ENST00000512025 362 ntBASIC2.85□□□□□ -1.95
LONRF3Q496Y0 RNU6-1012P-201ENST00000516606 109 ntBASIC2.85□□□□□ -1.95
LONRF3Q496Y0 RNU6-897P-201ENST00000517135 105 ntBASIC2.85□□□□□ -1.95
LONRF3Q496Y0 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.85□□□□□ -1.95
LONRF3Q496Y0 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.85□□□□□ -1.95
LONRF3Q496Y0 AC022616.8-201ENST00000533569 253 ntBASIC2.85□□□□□ -1.95
LONRF3Q496Y0 AC091544.4-201ENST00000555268 342 ntBASIC2.85□□□□□ -1.95
LONRF3Q496Y0 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.85□□□□□ -1.95
LONRF3Q496Y0 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.84□□□□□ -1.95
LONRF3Q496Y0 RNU6-280P-201ENST00000364145 104 ntBASIC2.84□□□□□ -1.95
LONRF3Q496Y0 MIR144-201ENST00000384886 86 ntBASIC2.84□□□□□ -1.95
LONRF3Q496Y0 SNORD78.2-201ENST00000391076 69 ntBASIC2.84□□□□□ -1.95
LONRF3Q496Y0 MIR1302-3-201ENST00000408128 138 ntBASIC2.84□□□□□ -1.95
LONRF3Q496Y0 MIR1294-201ENST00000408503 142 ntBASIC2.84□□□□□ -1.95
LONRF3Q496Y0 RNU6-1001P-201ENST00000411265 100 ntBASIC2.84□□□□□ -1.95
LONRF3Q496Y0 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.84□□□□□ -1.95
LONRF3Q496Y0 AC018868.1-201ENST00000491307 315 ntBASIC2.84□□□□□ -1.95
LONRF3Q496Y0 RNA5SP137-201ENST00000516833 135 ntBASIC2.84□□□□□ -1.95
LONRF3Q496Y0 SNORA40.15-201ENST00000516884 107 ntBASIC2.84□□□□□ -1.95
LONRF3Q496Y0 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.84□□□□□ -1.95
LONRF3Q496Y0 AC240442.1-201ENST00000616055 283 ntBASIC2.84□□□□□ -1.95
LONRF3Q496Y0 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.84□□□□□ -1.95
LONRF3Q496Y0 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.84□□□□□ -1.95
LONRF3Q496Y0 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
LONRF3Q496Y0 BX322639.1-202ENST00000423987 2213 ntBASIC2.84□□□□□ -1.96
LONRF3Q496Y0 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LONRF3Q496Y0 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
LONRF3Q496Y0 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LONRF3Q496Y0 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.83□□□□□ -1.96
LONRF3Q496Y0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.83□□□□□ -1.96
LONRF3Q496Y0 RNU6-611P-201ENST00000384276 104 ntBASIC2.83□□□□□ -1.96
LONRF3Q496Y0 SNORA46.1-201ENST00000391069 153 ntBASIC2.83□□□□□ -1.96
LONRF3Q496Y0 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.83□□□□□ -1.96
LONRF3Q496Y0 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.83□□□□□ -1.96
LONRF3Q496Y0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.83□□□□□ -1.96
LONRF3Q496Y0 MIR449C-201ENST00000516047 92 ntBASIC2.83□□□□□ -1.96
LONRF3Q496Y0 RNY3P15-201ENST00000516297 97 ntBASIC2.83□□□□□ -1.96
LONRF3Q496Y0 SNORA31.25-201ENST00000517242 134 ntBASIC2.83□□□□□ -1.96
LONRF3Q496Y0 IGLV3-17-201ENST00000519099 244 ntBASIC2.83□□□□□ -1.96
LONRF3Q496Y0 EIF4A1P12-201ENST00000551910 141 ntBASIC2.83□□□□□ -1.96
LONRF3Q496Y0 MIR4659A-201ENST00000580269 81 ntBASIC2.83□□□□□ -1.96
LONRF3Q496Y0 MIR3149-201ENST00000584629 83 ntBASIC2.83□□□□□ -1.96
LONRF3Q496Y0 AC011476.5-201ENST00000615594 130 ntBASIC2.83□□□□□ -1.96
LONRF3Q496Y0 AC010205.1-201ENST00000616668 449 ntBASIC2.83□□□□□ -1.96
LONRF3Q496Y0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
LONRF3Q496Y0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LONRF3Q496Y0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
LONRF3Q496Y0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.82□□□□□ -1.96
LONRF3Q496Y0 MIR6073-201ENST00000352083 89 ntBASIC2.82□□□□□ -1.96
LONRF3Q496Y0 RNA5SP289-201ENST00000362332 137 ntBASIC2.82□□□□□ -1.96
LONRF3Q496Y0 Y_RNA.26-201ENST00000362539 101 ntBASIC2.82□□□□□ -1.96
LONRF3Q496Y0 U3.9-201ENST00000363823 204 ntBASIC2.82□□□□□ -1.96
LONRF3Q496Y0 RNU6-770P-201ENST00000363929 105 ntBASIC2.82□□□□□ -1.96
LONRF3Q496Y0 RNU6-806P-201ENST00000365147 105 ntBASIC2.82□□□□□ -1.96
LONRF3Q496Y0 RNU6-926P-201ENST00000384075 107 ntBASIC2.82□□□□□ -1.96
LONRF3Q496Y0 Y_RNA.452-201ENST00000384202 108 ntBASIC2.82□□□□□ -1.96
LONRF3Q496Y0 MIR329-1-201ENST00000385028 80 ntBASIC2.82□□□□□ -1.96
LONRF3Q496Y0 SNORD12B-201ENST00000410433 91 ntBASIC2.82□□□□□ -1.96
LONRF3Q496Y0 OOSP1P1-201ENST00000423265 274 ntBASIC2.82□□□□□ -1.96
LONRF3Q496Y0 CBX3P6-201ENST00000430257 527 ntBASIC2.82□□□□□ -1.96
LONRF3Q496Y0 RPS12P2-201ENST00000439728 269 ntBASIC2.82□□□□□ -1.96
LONRF3Q496Y0 AL731563.1-201ENST00000442202 214 ntBASIC2.82□□□□□ -1.96
LONRF3Q496Y0 RNA5SP320-201ENST00000516263 124 ntBASIC2.82□□□□□ -1.96
LONRF3Q496Y0 SNORA25.14-201ENST00000516481 132 ntBASIC2.82□□□□□ -1.96
LONRF3Q496Y0 RN7SKP49-201ENST00000516675 260 ntBASIC2.82□□□□□ -1.96
LONRF3Q496Y0 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LONRF3Q496Y0 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.82□□□□□ -1.96
LONRF3Q496Y0 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.81□□□□□ -1.96
LONRF3Q496Y0 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
LONRF3Q496Y0 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LONRF3Q496Y0 Y_RNA.19-201ENST00000362462 99 ntBASIC2.81□□□□□ -1.96
LONRF3Q496Y0 Y_RNA.183-201ENST00000363882 113 ntBASIC2.81□□□□□ -1.96
LONRF3Q496Y0 RNA5SP456-201ENST00000364002 114 ntBASIC2.81□□□□□ -1.96
LONRF3Q496Y0 Y_RNA.222-201ENST00000364264 102 ntBASIC2.81□□□□□ -1.96
LONRF3Q496Y0 Y_RNA.439-201ENST00000384119 94 ntBASIC2.81□□□□□ -1.96
LONRF3Q496Y0 RNU6-1145P-201ENST00000384246 107 ntBASIC2.81□□□□□ -1.96
LONRF3Q496Y0 AL137159.1-201ENST00000452808 512 ntBASIC2.81□□□□□ -1.96
LONRF3Q496Y0 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.81□□□□□ -1.96
LONRF3Q496Y0 AL161670.1-201ENST00000554348 137 ntBASIC2.81□□□□□ -1.96
LONRF3Q496Y0 MIR3124-201ENST00000582636 67 ntBASIC2.81□□□□□ -1.96
LONRF3Q496Y0 U4.1-201ENST00000620349 87 ntBASIC2.81□□□□□ -1.96
LONRF3Q496Y0 AC130454.1-201ENST00000622948 401 ntBASIC2.81□□□□□ -1.96
LONRF3Q496Y0 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LONRF3Q496Y0 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
LONRF3Q496Y0 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LONRF3Q496Y0 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LONRF3Q496Y0 Y_RNA.64-201ENST00000362845 102 ntBASIC2.8□□□□□ -1.96
LONRF3Q496Y0 Y_RNA.105-201ENST00000363182 111 ntBASIC2.8□□□□□ -1.96
LONRF3Q496Y0 Y_RNA.193-201ENST00000363979 102 ntBASIC2.8□□□□□ -1.96
LONRF3Q496Y0 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 214.6 ms