Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 Z75741.1-201ENST00000446793 314 ntBASIC3.24□□□□□ -1.89
YBX1P67809 RNU7-141P-201ENST00000459304 62 ntBASIC3.24□□□□□ -1.89
YBX1P67809 CENPBD1P1-201ENST00000464061 469 ntBASIC3.24□□□□□ -1.89
YBX1P67809 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.24□□□□□ -1.89
YBX1P67809 SNORD19.2-201ENST00000516978 73 ntBASIC3.24□□□□□ -1.89
YBX1P67809 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.24□□□□□ -1.89
YBX1P67809 AL137843.1-201ENST00000605078 385 ntBASIC3.24□□□□□ -1.89
YBX1P67809 RNU6-91P-201ENST00000607774 107 ntBASIC3.24□□□□□ -1.89
YBX1P67809 AC011603.4-201ENST00000611325 277 ntBASIC3.24□□□□□ -1.89
YBX1P67809 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
YBX1P67809 AL391516.1-201ENST00000554380 2449 ntBASIC3.23□□□□□ -1.89
YBX1P67809 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
YBX1P67809 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
YBX1P67809 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.23□□□□□ -1.89
YBX1P67809 RNU6-407P-201ENST00000365280 104 ntBASIC3.23□□□□□ -1.89
YBX1P67809 Y_RNA.456-201ENST00000384232 111 ntBASIC3.23□□□□□ -1.89
YBX1P67809 MT-TT-201ENST00000387460 66 ntBASIC3.23□□□□□ -1.89
YBX1P67809 MIR526A2-201ENST00000390198 65 ntBASIC3.23□□□□□ -1.89
YBX1P67809 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.23□□□□□ -1.89
YBX1P67809 RNA5SP293-201ENST00000410527 113 ntBASIC3.23□□□□□ -1.89
YBX1P67809 RNU2-49P-201ENST00000410666 184 ntBASIC3.23□□□□□ -1.89
YBX1P67809 AIMP1P2-201ENST00000425294 312 ntBASIC3.23□□□□□ -1.89
YBX1P67809 HMGN1P18-201ENST00000457642 277 ntBASIC3.23□□□□□ -1.89
YBX1P67809 RNU7-170P-201ENST00000459303 61 ntBASIC3.23□□□□□ -1.89
YBX1P67809 AC091179.1-201ENST00000461606 579 ntBASIC3.23□□□□□ -1.89
YBX1P67809 FCF1P8-201ENST00000510322 597 ntBASIC3.23□□□□□ -1.89
YBX1P67809 HSPE1P18-201ENST00000517602 280 ntBASIC3.23□□□□□ -1.89
YBX1P67809 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.23□□□□□ -1.89
YBX1P67809 U6.115-201ENST00000636045 103 ntBASIC3.23□□□□□ -1.89
YBX1P67809 MFSD8-233ENST00000641482 4860 ntBASIC3.23□□□□□ -1.89
YBX1P67809 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
YBX1P67809 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
YBX1P67809 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.22□□□□□ -1.89
YBX1P67809 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.22□□□□□ -1.89
YBX1P67809 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
YBX1P67809 SNORD56.3-201ENST00000363507 71 ntBASIC3.22□□□□□ -1.89
YBX1P67809 Y_RNA.310-201ENST00000365063 113 ntBASIC3.22□□□□□ -1.89
YBX1P67809 MIR15B-201ENST00000385045 98 ntBASIC3.22□□□□□ -1.89
YBX1P67809 RN7SKP284-201ENST00000411002 343 ntBASIC3.22□□□□□ -1.89
YBX1P67809 RPL23AP58-201ENST00000440453 469 ntBASIC3.22□□□□□ -1.89
YBX1P67809 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.22□□□□□ -1.89
YBX1P67809 AC006539.3-201ENST00000454258 129 ntBASIC3.22□□□□□ -1.89
YBX1P67809 snoU13.14-201ENST00000459372 104 ntBASIC3.22□□□□□ -1.89
YBX1P67809 RNU4-57P-201ENST00000515980 135 ntBASIC3.22□□□□□ -1.89
YBX1P67809 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.22□□□□□ -1.89
YBX1P67809 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.22□□□□□ -1.89
YBX1P67809 MIR3186-201ENST00000577404 85 ntBASIC3.22□□□□□ -1.89
YBX1P67809 LARP7P3-201ENST00000579888 337 ntBASIC3.22□□□□□ -1.89
YBX1P67809 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.22□□□□□ -1.89
YBX1P67809 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.22□□□□□ -1.89
YBX1P67809 AL391903.3-201ENST00000612158 163 ntBASIC3.22□□□□□ -1.89
YBX1P67809 MIR8058-201ENST00000615737 89 ntBASIC3.22□□□□□ -1.89
YBX1P67809 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
YBX1P67809 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
YBX1P67809 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.22□□□□□ -1.89
YBX1P67809 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
YBX1P67809 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.21□□□□□ -1.89
YBX1P67809 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
YBX1P67809 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
YBX1P67809 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
YBX1P67809 U3.8-201ENST00000363675 217 ntBASIC3.21□□□□□ -1.9
YBX1P67809 RNU6-643P-201ENST00000384018 107 ntBASIC3.21□□□□□ -1.9
YBX1P67809 MIR128-1-201ENST00000384921 82 ntBASIC3.21□□□□□ -1.9
YBX1P67809 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
YBX1P67809 MIR1289-1-201ENST00000408836 144 ntBASIC3.21□□□□□ -1.9
YBX1P67809 RN7SKP111-201ENST00000410349 271 ntBASIC3.21□□□□□ -1.9
YBX1P67809 AC126124.2-201ENST00000413542 321 ntBASIC3.21□□□□□ -1.9
YBX1P67809 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.21□□□□□ -1.9
YBX1P67809 AL714022.1-201ENST00000439897 151 ntBASIC3.21□□□□□ -1.9
YBX1P67809 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.21□□□□□ -1.9
YBX1P67809 MIR4724-201ENST00000579485 89 ntBASIC3.21□□□□□ -1.9
YBX1P67809 MIR4276-201ENST00000584832 70 ntBASIC3.21□□□□□ -1.9
YBX1P67809 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
YBX1P67809 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
YBX1P67809 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
YBX1P67809 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.21□□□□□ -1.9
YBX1P67809 AC103988.1-201ENST00000566382 2177 ntBASIC3.21□□□□□ -1.9
YBX1P67809 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
YBX1P67809 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.2□□□□□ -1.9
YBX1P67809 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
YBX1P67809 MIR148B-201ENST00000362252 99 ntBASIC3.2□□□□□ -1.9
YBX1P67809 MIR367-201ENST00000362299 68 ntBASIC3.2□□□□□ -1.9
YBX1P67809 Y_RNA.229-201ENST00000364347 113 ntBASIC3.2□□□□□ -1.9
YBX1P67809 Y_RNA.510-201ENST00000384511 114 ntBASIC3.2□□□□□ -1.9
YBX1P67809 Y_RNA.521-201ENST00000384560 114 ntBASIC3.2□□□□□ -1.9
YBX1P67809 RNU6-460P-201ENST00000391158 108 ntBASIC3.2□□□□□ -1.9
YBX1P67809 AL606845.1-201ENST00000404881 255 ntBASIC3.2□□□□□ -1.9
YBX1P67809 RNU2-52P-201ENST00000410680 190 ntBASIC3.2□□□□□ -1.9
YBX1P67809 AL139281.1-201ENST00000422120 335 ntBASIC3.2□□□□□ -1.9
YBX1P67809 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.2□□□□□ -1.9
YBX1P67809 HSPE1P21-201ENST00000438283 308 ntBASIC3.2□□□□□ -1.9
YBX1P67809 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.2□□□□□ -1.9
YBX1P67809 RPS3P1-201ENST00000456781 192 ntBASIC3.2□□□□□ -1.9
YBX1P67809 RNU7-23P-201ENST00000459465 62 ntBASIC3.2□□□□□ -1.9
YBX1P67809 SRIP1-201ENST00000489235 288 ntBASIC3.2□□□□□ -1.9
YBX1P67809 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.2□□□□□ -1.9
YBX1P67809 SNORA70.12-201ENST00000516084 153 ntBASIC3.2□□□□□ -1.9
YBX1P67809 RNU6-561P-201ENST00000516222 102 ntBASIC3.2□□□□□ -1.9
YBX1P67809 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.2□□□□□ -1.9
YBX1P67809 AC012493.2-201ENST00000595083 291 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms