Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
USP11P51784 Y_RNA.229-201ENST00000364347 113 ntBASIC3.69□□□□□ -1.82
USP11P51784 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.69□□□□□ -1.82
USP11P51784 Y_RNA.341-201ENST00000365341 102 ntBASIC3.69□□□□□ -1.82
USP11P51784 RNU6-1056P-201ENST00000383996 107 ntBASIC3.69□□□□□ -1.82
USP11P51784 RNU6-643P-201ENST00000384018 107 ntBASIC3.69□□□□□ -1.82
USP11P51784 SNORA48.5-201ENST00000391143 135 ntBASIC3.69□□□□□ -1.82
USP11P51784 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
USP11P51784 RNU6-710P-201ENST00000410424 105 ntBASIC3.69□□□□□ -1.82
USP11P51784 AIMP1P2-201ENST00000425294 312 ntBASIC3.69□□□□□ -1.82
USP11P51784 CST9LP2-201ENST00000437612 320 ntBASIC3.69□□□□□ -1.82
USP11P51784 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.69□□□□□ -1.82
USP11P51784 EIF4A1P12-201ENST00000551910 141 ntBASIC3.69□□□□□ -1.82
USP11P51784 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.69□□□□□ -1.82
USP11P51784 MIR5680-201ENST00000577577 84 ntBASIC3.69□□□□□ -1.82
USP11P51784 AL137843.1-201ENST00000605078 385 ntBASIC3.69□□□□□ -1.82
USP11P51784 YPEL5P2-201ENST00000605553 359 ntBASIC3.69□□□□□ -1.82
USP11P51784 SNORD11B-201ENST00000607707 90 ntBASIC3.69□□□□□ -1.82
USP11P51784 TCL6_2.1-201ENST00000615162 119 ntBASIC3.69□□□□□ -1.82
USP11P51784 AC005562.2-201ENST00000618264 111 ntBASIC3.69□□□□□ -1.82
USP11P51784 AP001340.1-201ENST00000624405 217 ntBASIC3.69□□□□□ -1.82
USP11P51784 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
USP11P51784 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.69□□□□□ -1.82
USP11P51784 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.69□□□□□ -1.82
USP11P51784 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.69□□□□□ -1.82
USP11P51784 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
USP11P51784 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
USP11P51784 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.68□□□□□ -1.82
USP11P51784 Y_RNA.251-201ENST00000364551 99 ntBASIC3.68□□□□□ -1.82
USP11P51784 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
USP11P51784 SNORA18.2-201ENST00000383865 132 ntBASIC3.68□□□□□ -1.82
USP11P51784 Y_RNA.456-201ENST00000384232 111 ntBASIC3.68□□□□□ -1.82
USP11P51784 SNORA1.3-201ENST00000384676 136 ntBASIC3.68□□□□□ -1.82
USP11P51784 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
USP11P51784 AL606845.1-201ENST00000404881 255 ntBASIC3.68□□□□□ -1.82
USP11P51784 TRIAP1P1-201ENST00000427062 225 ntBASIC3.68□□□□□ -1.82
USP11P51784 AC006028.1-201ENST00000438379 402 ntBASIC3.68□□□□□ -1.82
USP11P51784 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.68□□□□□ -1.82
USP11P51784 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.68□□□□□ -1.82
USP11P51784 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.68□□□□□ -1.82
USP11P51784 RN7SL442P-201ENST00000473804 320 ntBASIC3.68□□□□□ -1.82
USP11P51784 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.68□□□□□ -1.82
USP11P51784 SCARNA13-201ENST00000516672 275 ntBASIC3.68□□□□□ -1.82
USP11P51784 RNU1-117P-201ENST00000517041 158 ntBASIC3.68□□□□□ -1.82
USP11P51784 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.68□□□□□ -1.82
USP11P51784 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.68□□□□□ -1.82
USP11P51784 MIR2682-201ENST00000580305 110 ntBASIC3.68□□□□□ -1.82
USP11P51784 AC091152.3-201ENST00000604227 325 ntBASIC3.68□□□□□ -1.82
USP11P51784 MIR6076-201ENST00000617521 113 ntBASIC3.68□□□□□ -1.82
USP11P51784 MIR3199-2-201ENST00000636243 86 ntBASIC3.68□□□□□ -1.82
USP11P51784 MIR7153-201ENST00000637758 57 ntBASIC3.68□□□□□ -1.82
USP11P51784 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.68□□□□□ -1.82
USP11P51784 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
USP11P51784 RNU6-1205P-201ENST00000363625 106 ntBASIC3.67□□□□□ -1.82
USP11P51784 RNU6-1180P-201ENST00000364935 107 ntBASIC3.67□□□□□ -1.82
USP11P51784 RNU6-588P-201ENST00000410281 105 ntBASIC3.67□□□□□ -1.82
USP11P51784 AL353705.1-201ENST00000433468 480 ntBASIC3.67□□□□□ -1.82
USP11P51784 BX510359.1-201ENST00000456973 237 ntBASIC3.67□□□□□ -1.82
USP11P51784 AC006483.1-201ENST00000487308 313 ntBASIC3.67□□□□□ -1.82
USP11P51784 RNU2-56P-201ENST00000516826 190 ntBASIC3.67□□□□□ -1.82
USP11P51784 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.67□□□□□ -1.82
USP11P51784 MIR3609-201ENST00000582661 80 ntBASIC3.67□□□□□ -1.82
USP11P51784 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
USP11P51784 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.67□□□□□ -1.82
USP11P51784 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
USP11P51784 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.66□□□□□ -1.82
USP11P51784 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.66□□□□□ -1.82
USP11P51784 Z92545.1-201ENST00000411782 234 ntBASIC3.66□□□□□ -1.82
USP11P51784 TOMM22P2-201ENST00000430735 237 ntBASIC3.66□□□□□ -1.82
USP11P51784 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.66□□□□□ -1.82
USP11P51784 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.66□□□□□ -1.82
USP11P51784 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.66□□□□□ -1.82
USP11P51784 snoU13.28-201ENST00000459235 104 ntBASIC3.66□□□□□ -1.82
USP11P51784 AC105137.2-201ENST00000569073 466 ntBASIC3.66□□□□□ -1.82
USP11P51784 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.66□□□□□ -1.82
USP11P51784 MIR3646-201ENST00000578301 84 ntBASIC3.66□□□□□ -1.82
USP11P51784 MIR5688-201ENST00000580619 83 ntBASIC3.66□□□□□ -1.82
USP11P51784 MIR5006-201ENST00000583027 110 ntBASIC3.66□□□□□ -1.82
USP11P51784 HSPE1P7-201ENST00000604681 321 ntBASIC3.66□□□□□ -1.82
USP11P51784 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.66□□□□□ -1.82
USP11P51784 MIR6129-201ENST00000616087 109 ntBASIC3.66□□□□□ -1.82
USP11P51784 MIR3651-201ENST00000630427 90 ntBASIC3.66□□□□□ -1.82
USP11P51784 MIR6844-201ENST00000637122 62 ntBASIC3.66□□□□□ -1.82
USP11P51784 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
USP11P51784 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.66□□□□□ -1.82
USP11P51784 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
USP11P51784 MAPK10-362ENST00000641864 4484 ntBASIC3.66□□□□□ -1.82
USP11P51784 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.66□□□□□ -1.82
USP11P51784 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
USP11P51784 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
USP11P51784 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
USP11P51784 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
USP11P51784 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.82
USP11P51784 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
USP11P51784 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
USP11P51784 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.65□□□□□ -1.82
USP11P51784 RNU6-1228P-201ENST00000391014 107 ntBASIC3.65□□□□□ -1.83
USP11P51784 RNU6-1064P-201ENST00000410626 104 ntBASIC3.65□□□□□ -1.83
USP11P51784 RNU6-383P-201ENST00000410864 94 ntBASIC3.65□□□□□ -1.83
USP11P51784 CYCSP49-201ENST00000420810 319 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms