Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 MIR5194-201ENST00000582634 120 ntBASIC2.37□□□□□ -2.03
SOX2P48431 MIR4753-201ENST00000585119 83 ntBASIC2.37□□□□□ -2.03
SOX2P48431 AL109918.3-201ENST00000603072 338 ntBASIC2.37□□□□□ -2.03
SOX2P48431 AC022441.3-201ENST00000605737 136 ntBASIC2.37□□□□□ -2.03
SOX2P48431 AC004467.1-201ENST00000615678 330 ntBASIC2.37□□□□□ -2.03
SOX2P48431 AP001282.2-201ENST00000616149 309 ntBASIC2.37□□□□□ -2.03
SOX2P48431 AC006001.4-201ENST00000622243 395 ntBASIC2.37□□□□□ -2.03
SOX2P48431 AC091932.3-201ENST00000624223 323 ntBASIC2.37□□□□□ -2.03
SOX2P48431 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.37□□□□□ -2.03
SOX2P48431 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SOX2P48431 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
SOX2P48431 AC096644.4-201ENST00000563417 2912 ntBASIC2.37□□□□□ -2.03
SOX2P48431 MIR335-201ENST00000362173 94 ntBASIC2.36□□□□□ -2.03
SOX2P48431 MIR422A-201ENST00000362286 90 ntBASIC2.36□□□□□ -2.03
SOX2P48431 Y_RNA.14-201ENST00000362415 103 ntBASIC2.36□□□□□ -2.03
SOX2P48431 RNA5SP393-201ENST00000363423 117 ntBASIC2.36□□□□□ -2.03
SOX2P48431 Y_RNA.237-201ENST00000364439 102 ntBASIC2.36□□□□□ -2.03
SOX2P48431 Y_RNA.286-201ENST00000364813 102 ntBASIC2.36□□□□□ -2.03
SOX2P48431 RNA5SP125-201ENST00000364843 120 ntBASIC2.36□□□□□ -2.03
SOX2P48431 SNORD31B-201ENST00000364977 69 ntBASIC2.36□□□□□ -2.03
SOX2P48431 RNU6-438P-201ENST00000365561 103 ntBASIC2.36□□□□□ -2.03
SOX2P48431 Y_RNA.476-201ENST00000384347 108 ntBASIC2.36□□□□□ -2.03
SOX2P48431 MIR34B-201ENST00000385076 84 ntBASIC2.36□□□□□ -2.03
SOX2P48431 MIR561-201ENST00000385216 97 ntBASIC2.36□□□□□ -2.03
SOX2P48431 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SOX2P48431 AL357139.1-201ENST00000407792 426 ntBASIC2.36□□□□□ -2.03
SOX2P48431 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.36□□□□□ -2.03
SOX2P48431 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.36□□□□□ -2.03
SOX2P48431 AC005042.3-201ENST00000453230 174 ntBASIC2.36□□□□□ -2.03
SOX2P48431 RPL39P38-201ENST00000467018 153 ntBASIC2.36□□□□□ -2.03
SOX2P48431 AC114982.1-201ENST00000469402 321 ntBASIC2.36□□□□□ -2.03
SOX2P48431 HMGN2P9-201ENST00000476875 229 ntBASIC2.36□□□□□ -2.03
SOX2P48431 RNU6-1338P-201ENST00000516328 91 ntBASIC2.36□□□□□ -2.03
SOX2P48431 DEFB108E-201ENST00000524692 240 ntBASIC2.36□□□□□ -2.03
SOX2P48431 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.36□□□□□ -2.03
SOX2P48431 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.36□□□□□ -2.03
SOX2P48431 MIR4635-201ENST00000583759 79 ntBASIC2.36□□□□□ -2.03
SOX2P48431 SDR42E1P4-201ENST00000620894 481 ntBASIC2.36□□□□□ -2.03
SOX2P48431 MIR1248-201ENST00000629190 106 ntBASIC2.36□□□□□ -2.03
SOX2P48431 Z82195.2-201ENST00000612348 18351 ntBASIC2.36□□□□□ -2.03
SOX2P48431 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
SOX2P48431 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.35□□□□□ -2.03
SOX2P48431 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
SOX2P48431 Y_RNA.16-201ENST00000362421 102 ntBASIC2.35□□□□□ -2.03
SOX2P48431 Y_RNA.333-201ENST00000365274 102 ntBASIC2.35□□□□□ -2.03
SOX2P48431 Y_RNA.447-201ENST00000384184 113 ntBASIC2.35□□□□□ -2.03
SOX2P48431 Y_RNA.489-201ENST00000384410 101 ntBASIC2.35□□□□□ -2.03
SOX2P48431 MIR548B-201ENST00000385247 97 ntBASIC2.35□□□□□ -2.03
SOX2P48431 SNORA53-201ENST00000391141 249 ntBASIC2.35□□□□□ -2.03
SOX2P48431 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.35□□□□□ -2.03
SOX2P48431 SRIP1-201ENST00000489235 288 ntBASIC2.35□□□□□ -2.03
SOX2P48431 HMGB3P17-201ENST00000504195 649 ntBASIC2.35□□□□□ -2.03
SOX2P48431 ATP5EP1-201ENST00000510257 156 ntBASIC2.35□□□□□ -2.03
SOX2P48431 AP002001.1-203ENST00000534002 267 ntBASIC2.35□□□□□ -2.03
SOX2P48431 AC004486.1-201ENST00000546846 233 ntBASIC2.35□□□□□ -2.03
SOX2P48431 AC008749.1-201ENST00000597650 306 ntBASIC2.35□□□□□ -2.03
SOX2P48431 AC037487.3-201ENST00000606668 112 ntBASIC2.35□□□□□ -2.03
SOX2P48431 AC127459.3-201ENST00000624328 466 ntBASIC2.35□□□□□ -2.03
SOX2P48431 IGHVIII-44-202ENST00000636235 289 ntBASIC2.35□□□□□ -2.03
SOX2P48431 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SOX2P48431 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SOX2P48431 Y_RNA.101-201ENST00000363154 102 ntBASIC2.34□□□□□ -2.03
SOX2P48431 SNORA70.4-201ENST00000365509 134 ntBASIC2.34□□□□□ -2.03
SOX2P48431 Y_RNA.446-201ENST00000384178 104 ntBASIC2.34□□□□□ -2.03
SOX2P48431 Y_RNA.562-201ENST00000384695 113 ntBASIC2.34□□□□□ -2.03
SOX2P48431 Y_RNA.569-201ENST00000384749 103 ntBASIC2.34□□□□□ -2.03
SOX2P48431 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
SOX2P48431 AL139095.1-201ENST00000404326 391 ntBASIC2.34□□□□□ -2.03
SOX2P48431 RNU2-54P-201ENST00000410299 190 ntBASIC2.34□□□□□ -2.03
SOX2P48431 HMGN2P18-201ENST00000450680 270 ntBASIC2.34□□□□□ -2.03
SOX2P48431 RPS29P26-201ENST00000477483 171 ntBASIC2.34□□□□□ -2.03
SOX2P48431 RNU6-155P-201ENST00000516347 100 ntBASIC2.34□□□□□ -2.03
SOX2P48431 RNA5SP490-201ENST00000517141 136 ntBASIC2.34□□□□□ -2.03
SOX2P48431 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.34□□□□□ -2.03
SOX2P48431 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.34□□□□□ -2.03
SOX2P48431 MIR4446-201ENST00000578505 67 ntBASIC2.34□□□□□ -2.03
SOX2P48431 AC012433.1-201ENST00000588916 398 ntBASIC2.34□□□□□ -2.03
SOX2P48431 AC006380.1-201ENST00000603598 186 ntBASIC2.34□□□□□ -2.03
SOX2P48431 AL590240.4-201ENST00000616908 390 ntBASIC2.34□□□□□ -2.03
SOX2P48431 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
SOX2P48431 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.34□□□□□ -2.04
SOX2P48431 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
SOX2P48431 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.04
SOX2P48431 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SOX2P48431 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.33□□□□□ -2.04
SOX2P48431 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.33□□□□□ -2.04
SOX2P48431 RNU6-743P-201ENST00000364151 106 ntBASIC2.33□□□□□ -2.04
SOX2P48431 RNA5SP387-201ENST00000364226 106 ntBASIC2.33□□□□□ -2.04
SOX2P48431 SNORA48.5-201ENST00000391143 135 ntBASIC2.33□□□□□ -2.04
SOX2P48431 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SOX2P48431 MIR548H3-201ENST00000408771 118 ntBASIC2.33□□□□□ -2.04
SOX2P48431 EEF1A1P41-201ENST00000414667 207 ntBASIC2.33□□□□□ -2.04
SOX2P48431 AC009963.1-201ENST00000417265 157 ntBASIC2.33□□□□□ -2.04
SOX2P48431 AC139712.2-201ENST00000424302 339 ntBASIC2.33□□□□□ -2.04
SOX2P48431 POLR2KP2-201ENST00000438155 177 ntBASIC2.33□□□□□ -2.04
SOX2P48431 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.33□□□□□ -2.04
SOX2P48431 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.33□□□□□ -2.04
SOX2P48431 RNU2-31P-201ENST00000516954 155 ntBASIC2.33□□□□□ -2.04
SOX2P48431 SCARNA24.2-201ENST00000516968 130 ntBASIC2.33□□□□□ -2.04
SOX2P48431 RN7SKP57-201ENST00000517248 293 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms