Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC008088.1-201ENST00000580993 280 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 MIR4775-201ENST00000581168 75 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 AC018714.1-201ENST00000605028 208 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 Z84480.1-201ENST00000605131 311 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.37□□□□□ -2.35
COL4A5P29400 AL359075.3-201ENST00000613288 217 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 MIR7844-201ENST00000616161 122 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 SNORD3E-202ENST00000627253 216 ntBASIC0.37□□□□□ -2.35
COL4A5P29400 Y_RNA.22-201ENST00000362492 102 ntBASIC0.36□□□□□ -2.35
COL4A5P29400 RNU4-79P-201ENST00000362764 141 ntBASIC0.36□□□□□ -2.35
COL4A5P29400 RNU6-827P-201ENST00000365553 106 ntBASIC0.36□□□□□ -2.35
COL4A5P29400 Y_RNA.488-201ENST00000384403 102 ntBASIC0.36□□□□□ -2.35
COL4A5P29400 MIR32-201ENST00000384965 70 ntBASIC0.36□□□□□ -2.35
COL4A5P29400 AL451046.2-201ENST00000403074 277 ntBASIC0.36□□□□□ -2.35
COL4A5P29400 AC106883.1-201ENST00000418805 562 ntBASIC0.36□□□□□ -2.35
COL4A5P29400 HSFY7P-201ENST00000432672 318 ntBASIC0.36□□□□□ -2.35
COL4A5P29400 HSFY8P-201ENST00000437934 318 ntBASIC0.36□□□□□ -2.35
COL4A5P29400 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.36□□□□□ -2.35
COL4A5P29400 USP9YP12-201ENST00000450481 570 ntBASIC0.36□□□□□ -2.35
COL4A5P29400 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.36□□□□□ -2.35
COL4A5P29400 RNU6-1198P-201ENST00000516904 67 ntBASIC0.36□□□□□ -2.35
COL4A5P29400 RNA5SP54-201ENST00000516951 92 ntBASIC0.36□□□□□ -2.35
COL4A5P29400 SNORA25.17-201ENST00000517184 124 ntBASIC0.36□□□□□ -2.35
COL4A5P29400 MIR4723-201ENST00000585070 81 ntBASIC0.36□□□□□ -2.35
COL4A5P29400 AC106754.2-201ENST00000623006 233 ntBASIC0.36□□□□□ -2.35
COL4A5P29400 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.36□□□□□ -2.35
COL4A5P29400 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
COL4A5P29400 CASC19-280ENST00000642102 1351 ntBASIC0.35□□□□□ -2.35
COL4A5P29400 RNU6-793P-201ENST00000384233 104 ntBASIC0.35□□□□□ -2.35
COL4A5P29400 AL034345.1-201ENST00000407768 123 ntBASIC0.35□□□□□ -2.35
COL4A5P29400 MTCO2P3-201ENST00000442543 421 ntBASIC0.35□□□□□ -2.35
COL4A5P29400 AC113410.1-201ENST00000505029 247 ntBASIC0.35□□□□□ -2.35
COL4A5P29400 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.35□□□□□ -2.35
COL4A5P29400 SNORA14.1-201ENST00000516113 141 ntBASIC0.35□□□□□ -2.35
COL4A5P29400 AC104010.1-201ENST00000616889 150 ntBASIC0.35□□□□□ -2.35
COL4A5P29400 AC009509.4-201ENST00000619202 509 ntBASIC0.35□□□□□ -2.35
COL4A5P29400 AL513423.1-201ENST00000621695 132 ntBASIC0.35□□□□□ -2.35
COL4A5P29400 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC0.35□□□□□ -2.35
COL4A5P29400 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.35□□□□□ -2.35
COL4A5P29400 MTND4P5-201ENST00000435821 1374 ntBASIC0.35□□□□□ -2.35
COL4A5P29400 RNU6-199P-201ENST00000362954 107 ntBASIC0.34□□□□□ -2.35
COL4A5P29400 Y_RNA.287-201ENST00000364853 94 ntBASIC0.34□□□□□ -2.35
COL4A5P29400 RNU6-700P-201ENST00000391043 107 ntBASIC0.34□□□□□ -2.35
COL4A5P29400 RNU6-1186P-201ENST00000410429 97 ntBASIC0.34□□□□□ -2.35
COL4A5P29400 RNU4-46P-201ENST00000410818 138 ntBASIC0.34□□□□□ -2.35
COL4A5P29400 AL354692.1-201ENST00000423044 315 ntBASIC0.34□□□□□ -2.35
COL4A5P29400 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.34□□□□□ -2.35
COL4A5P29400 AC022364.2-201ENST00000457963 554 ntBASIC0.34□□□□□ -2.35
COL4A5P29400 U7.7-201ENST00000459276 60 ntBASIC0.34□□□□□ -2.35
COL4A5P29400 AC010493.1-201ENST00000513479 292 ntBASIC0.34□□□□□ -2.35
COL4A5P29400 RNU6-1069P-201ENST00000516612 133 ntBASIC0.34□□□□□ -2.35
COL4A5P29400 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.34□□□□□ -2.35
COL4A5P29400 Z99497.2-201ENST00000603634 310 ntBASIC0.34□□□□□ -2.35
COL4A5P29400 AL121992.2-201ENST00000606262 256 ntBASIC0.34□□□□□ -2.35
COL4A5P29400 AL360219.1-201ENST00000610230 366 ntBASIC0.34□□□□□ -2.35
COL4A5P29400 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.34□□□□□ -2.35
COL4A5P29400 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.34□□□□□ -2.35
COL4A5P29400 AC022418.1-201ENST00000624118 445 ntBASIC0.34□□□□□ -2.35
COL4A5P29400 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.34□□□□□ -2.36
COL4A5P29400 RNU4-76P-201ENST00000364509 141 ntBASIC0.33□□□□□ -2.36
COL4A5P29400 RNY4P34-201ENST00000364779 95 ntBASIC0.33□□□□□ -2.36
COL4A5P29400 RNU6-715P-201ENST00000365204 103 ntBASIC0.33□□□□□ -2.36
COL4A5P29400 MIR586-201ENST00000385035 97 ntBASIC0.33□□□□□ -2.36
COL4A5P29400 MIR549A-201ENST00000385268 96 ntBASIC0.33□□□□□ -2.36
COL4A5P29400 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.33□□□□□ -2.36
COL4A5P29400 BET1P1-201ENST00000482276 359 ntBASIC0.33□□□□□ -2.36
COL4A5P29400 COX6CP6-201ENST00000490840 228 ntBASIC0.33□□□□□ -2.36
COL4A5P29400 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.33□□□□□ -2.36
COL4A5P29400 RNU6-197P-201ENST00000516680 100 ntBASIC0.33□□□□□ -2.36
COL4A5P29400 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.33□□□□□ -2.36
COL4A5P29400 FGF7P1-201ENST00000582820 288 ntBASIC0.33□□□□□ -2.36
COL4A5P29400 AC104465.1-201ENST00000611365 139 ntBASIC0.33□□□□□ -2.36
COL4A5P29400 Pinc.1-201ENST00000616452 154 ntBASIC0.33□□□□□ -2.36
COL4A5P29400 AC009159.2-201ENST00000617603 606 ntBASIC0.33□□□□□ -2.36
COL4A5P29400 AP000720.1-201ENST00000625091 483 ntBASIC0.33□□□□□ -2.36
COL4A5P29400 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
COL4A5P29400 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
COL4A5P29400 RNA5SP361-201ENST00000362686 118 ntBASIC0.33□□□□□ -2.36
COL4A5P29400 RNU5F-6P-201ENST00000362979 116 ntBASIC0.33□□□□□ -2.36
COL4A5P29400 Y_RNA.571-201ENST00000384753 98 ntBASIC0.33□□□□□ -2.36
COL4A5P29400 AC098592.1-201ENST00000419352 333 ntBASIC0.33□□□□□ -2.36
COL4A5P29400 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.33□□□□□ -2.36
COL4A5P29400 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.33□□□□□ -2.36
COL4A5P29400 AC004386.2-201ENST00000441858 148 ntBASIC0.33□□□□□ -2.36
COL4A5P29400 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.33□□□□□ -2.36
COL4A5P29400 U8.21-201ENST00000459536 136 ntBASIC0.33□□□□□ -2.36
COL4A5P29400 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.33□□□□□ -2.36
COL4A5P29400 RNU4-54P-201ENST00000516428 129 ntBASIC0.33□□□□□ -2.36
COL4A5P29400 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.33□□□□□ -2.36
COL4A5P29400 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.33□□□□□ -2.36
COL4A5P29400 AC026470.2-201ENST00000561492 181 ntBASIC0.33□□□□□ -2.36
COL4A5P29400 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.33□□□□□ -2.36
COL4A5P29400 MIR4742-201ENST00000581069 85 ntBASIC0.33□□□□□ -2.36
COL4A5P29400 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.33□□□□□ -2.36
COL4A5P29400 SNORA28-201ENST00000606769 126 ntBASIC0.33□□□□□ -2.36
COL4A5P29400 U2.17-201ENST00000611454 95 ntBASIC0.33□□□□□ -2.36
COL4A5P29400 Y_RNA.48-201ENST00000362710 103 ntBASIC0.32□□□□□ -2.36
COL4A5P29400 RNU6-1305P-201ENST00000364353 104 ntBASIC0.32□□□□□ -2.36
COL4A5P29400 Y_RNA.476-201ENST00000384347 108 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms